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R. norvegicus Gene: Adamtsl4 - ENSRNOG00000049385 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000049385
NameAdamtsl4
DescriptionADAMTS-like 4 [Source:RGD Symbol;Acc:1561012]
OrganismRattus norvegicus (rat)
Synonym(s)mgc116260, tsrc1
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.30e3
  • 2.30e3
91.62
  • 91.62
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
89.69
  • 89.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
89.67
  • 89.67
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.06e3
  • 4.06e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
5.55e3
  • 5.55e3
  • 5.66e3
  • 6.04e3
79.79
  • 79.79
  • 79.37
  • 77.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.08e3
  • 6.08e3
77.86
  • 77.86
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.32e3
  • 6.32e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.44e3
  • 6.44e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.19e3
  • 7.19e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.97e3
  • 7.97e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.14e3
  • 8.14e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.42e3
  • 9.42e3
65.68
  • 65.68
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
64.63
  • 64.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.76
  • 61.76
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
  • 1.44e4
57.07
  • 57.07
  • 47.54
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.34
  • 55.34
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.16
  • 52.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.47e4
51.16
  • 51.16
  • 46.40
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.50e4
48.42
  • 48.42
  • 45.30
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
38.77
  • 38.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000049385.

Cross-references

EnsemblENSRNOG00000049385 (Adamtsl4)
RGD1561012 (Adamtsl4)
EMBLBC099119
Uniprot/SWISSPROTATL4_RAT, Q4FZU4

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