R. norvegicus Gene: Htr6 - ENSRNOG00000049761 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000049761
NameHtr6
Description5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled [Source:RGD Symbol;Acc:62044]
OrganismRattus norvegicus (rat)
Synonym(s)5-ht-6, 5-ht6, st-b17

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.51e4
57.64639
  • 57.64639
  • 44.78947
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 2.21e4
53.14557
  • 53.14557
  • 19.53897
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.74972
  • 36.74972
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.30120
  • 29.30120
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.47489
  • 28.47489
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07050233, L03202, L19656, S62043
EnsemblENSRNOG00000049761 (Htr6)
RGD62044 (Htr6)
Uniprot/SPTREMBLA0A0G2JYX7, A0A0G2JYX7_RAT, M0R4S0, M0R4S0_RAT
Uniprot/SWISSPROT5HT6R_RAT, P31388

Do not show this banner again