Gene: Crlf2 - ENSRNOG00000049828 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000049828
Name	Crlf2
Description	cytokine receptor-like factor 2 [Source:RGD Symbol;Acc:621078]
Organism	Rattus norvegicus (rat)
Synonym(s)	crl2, tpte2, tslpr
Orthologs(s)	7 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.47e3 4.47e3 5.90e3	83.71 83.71 78.53	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	5.40e3 5.40e3 9.69e3	80.34 80.34 64.72	AEIR AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.45e3 5.45e3	80.17 80.17	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.80e3 5.80e3	78.89 78.89	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.78e3 6.78e3	75.32 75.32	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.03e3 7.03e3	74.40 74.40	AEIR AEIR
UBERON:0002107	liver	[+] 3 stages UBERON:0034920infant stage RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage	7.07e3 7.07e3 7.41e3 8.88e3	74.25 74.25 73.00 67.66	AEIR AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.12e3 7.12e3	74.08 74.08	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.34e3 7.34e3	73.25 73.25	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.37e3 7.37e3	73.14 73.14	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.69e3 7.69e3	71.99 71.99	AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.11e3 8.11e3	70.45 70.45	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.58e3 8.58e3	68.73 68.73	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.36e3 9.36e3	65.90 65.90	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	9.74e3 9.74e3 9.84e3	64.52 64.52 64.17	AEIR AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.91e3 9.91e3	63.89 63.89	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.96e3 9.96e3	63.70 63.70	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.04e4 1.04e4	62.16 62.16	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.08e4 1.08e4	60.79 60.79	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.10e4 1.10e4	60.02 60.02	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.12e4 1.12e4	59.38 59.38	AEIR AEIR
UBERON:0001954	Ammon's horn	[+] 2 stages RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage	1.51e4 1.51e4 1.51e4	45.01 45.01 44.87	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: GEO
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Murinae	1 species Mus musculus (mouse)	1 gene ENSMUSG00000033467 Crlf2	Compare expression	[+]
Euarchontoglires	2 species Homo sapiens (human) Mus musculus (mouse)	2 genes ENSG00000205755 CRLF2 ENSMUSG00000033467 Crlf2	Compare expression	[+]
Boreoeutheria	5 species Homo sapiens (human) Mus musculus (mouse) Bos taurus (cattle) Canis lupus familiaris (dog) Felis catus (cat)	5 genes ENSG00000205755 CRLF2 ENSMUSG00000033467 Crlf2 ENSBTAG00000020242 CRLF2 ENSCAFG00000011034 CRLF2 ENSFCAG00000026498 CRLF2	Compare expression	[+]
Mammalia	6 species Homo sapiens (human) Mus musculus (mouse) Bos taurus (cattle) Canis lupus familiaris (dog) Felis catus (cat) Ornithorhynchus anatinus (platypus)	6 genes ENSG00000205755 CRLF2 ENSMUSG00000033467 Crlf2 ENSBTAG00000020242 CRLF2 ENSCAFG00000011034 CRLF2 ENSFCAG00000026498 CRLF2 ENSOANG00000004012 CRLF2	Compare expression	[+]
Amniota	7 species Homo sapiens (human) Mus musculus (mouse) Bos taurus (cattle) Canis lupus familiaris (dog) Felis catus (cat) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	7 genes ENSG00000205755 CRLF2 ENSMUSG00000033467 Crlf2 ENSBTAG00000020242 CRLF2 ENSCAFG00000011034 CRLF2 ENSFCAG00000026498 CRLF2 ENSOANG00000004012 CRLF2 ENSGALG00000016696 CRLF2	Compare expression	[+]

Orthology information comes from OMA : ENSRNOG00000049828.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Murinae	1 gene ENSRNOG00000038397 AABR07073531.1	Compare expression	[+]

Paralogy information comes from OMA : ENSRNOG00000049828.

Cross-references

Ensembl	ENSRNOG00000049828 (Crlf2)
RGD	621078 (Crlf2)
EMBL	AABR07014121, BC078740, CH474114
Uniprot/SPTREMBL	Q6AZ53, Q6AZ53_RAT