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R. norvegicus Gene: Chid1 - ENSRNOG00000050181 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000050181
NameChid1
Descriptionchitinase domain containing 1 [Source:RGD Symbol;Acc:1308955]
OrganismRattus norvegicus (rat)
Synonym(s)cc1-9, loc100911881, loc293628, mgc156830, rgd1308955
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.69e3
  • 2.69e3
90.20
  • 90.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.81e3
  • 2.81e3
  • 3.93e3
89.78
  • 89.78
  • 85.69
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.17e3
  • 3.17e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
88.05
  • 88.05
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.39e3
  • 3.39e3
  • 5.74e3
87.66
  • 87.66
  • 79.09
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
3.58e3
  • 3.58e3
  • 3.97e3
  • 1.52e4
86.96
  • 86.96
  • 85.53
  • 44.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
86.79
  • 86.79
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.10e3
  • 5.10e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.27e3
  • 5.27e3
80.80
  • 80.80
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.42e3
  • 5.42e3
80.25
  • 80.25
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.43e3
  • 5.43e3
80.22
  • 80.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.69e3
  • 5.69e3
  • 9.68e3
79.27
  • 79.27
  • 64.75
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.11e3
  • 6.11e3
77.73
  • 77.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.69e3
  • 6.69e3
75.63
  • 75.63
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.95e3
  • 6.95e3
74.69
  • 74.69
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.72e3
  • 8.72e3
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.94e3
  • 8.94e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.98e3
  • 8.98e3
67.31
  • 67.31
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.25
  • 61.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000050181.

Cross-references

EnsemblENSRNOG00000050181 (Chid1)
RGD1308955 (Chid1), 6490147 (LOC100911881)
EMBLAABR07006025, AC109542, AY325242
Uniprot/SPTREMBLQ7TP14, Q7TP14_RAT

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