R. norvegicus Gene: Shank2 - ENSRNOG00000050206 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000050206
NameShank2
DescriptionSH3 and multiple ankyrin repeat domains 2 [Source:RGD Symbol;Acc:628772]
OrganismRattus norvegicus (rat)
Synonym(s)cortbp1, o70470, prosap1, q6wb19, q9qx93, q9qzz9, q9wuv9, q9wuw0, q9wv46, spank-3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.95e3
  • 1.95e3
  • 3.95e3
92.91
  • 92.91
  • 85.61
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.44e3
  • 3.44e3
  • 5.63e3
87.46
  • 87.46
  • 79.46
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
3.86e3
  • 3.86e3
  • 4.01e3
85.94
  • 85.94
  • 85.36
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.77
  • 76.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
  • 7.92e3
72.51
  • 72.51
  • 71.12
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.69e3
  • 8.69e3
68.31
  • 68.31
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.96e3
  • 9.96e3
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.15
  • 55.15
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.09
  • 52.09
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.68
  • 51.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
  • 1.75e4
44.81
  • 44.81
  • 36.33
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.38
  • 39.38
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.90
  • 36.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
33.43
  • 33.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07006076, AABR07072008, AABR07072009, AC125304, AC131216, AF060116, AF141903, AF159048, AJ131899, AJ249562, AY298755
EnsemblENSRNOG00000050206 (Shank2)
RGD628772 (Shank2)
Uniprot/SPTREMBLM0R5T5, M0R5T5_RAT, M0R8T7, M0R8T7_RAT, M0RDX8, M0RDX8_RAT
Uniprot/SWISSPROTQ9QX74, SHAN2_RAT

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