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R. norvegicus Gene: Camk2b - ENSRNOG00000052080 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000052080
NameCamk2b
Descriptioncalcium/calmodulin-dependent protein kinase II beta [Source:RGD Symbol;Acc:2262]
OrganismRattus norvegicus (rat)
Synonym(s)camk2b {eco:0000313|embl:edm00332.1,gn eco:0000313|ensembl:ensrnop00000058882}, ck2b
Orthologs(s)18 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
325
  • 325
  • 338
98.82
  • 98.82
  • 98.77
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
385
  • 385
  • 420
98.60
  • 98.60
  • 98.47
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
560
  • 560
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
745
  • 745
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
96.20
  • 96.20
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
92.46
  • 92.46
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.02e3
  • 4.02e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.56e3
  • 6.56e3
76.09
  • 76.09
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.66
  • 58.66
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.10
  • 58.10
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.45
  • 57.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
  • 1.52e4
55.15
  • 55.15
  • 44.66
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.27
  • 54.27
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.95
  • 50.95
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
50.45
  • 50.45
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
46.57
  • 46.57
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.71
  • 45.71
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.65e4
45.56
  • 45.56
  • 39.87
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression
Euteleostomi13 species13 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000052080.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000052080.

Cross-references

EnsemblENSRNOG00000052080 (Camk2b)
RGD2262 (Camk2b)
EMBLAC110110, CH473963
Uniprot/SPTREMBLF1LNI8, F1LNI8_RAT, F1LUE2, F1LUE2_RAT, G3V9G3, G3V9G3_RAT

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