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R. norvegicus Gene: Phf11b - ENSRNOG00000053891 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000053891
NamePhf11b
DescriptionPHD finger protein 11B [Source:RGD Symbol;Acc:1359377]
OrganismRattus norvegicus (rat)
Synonym(s)loc100362359, loc364393, phf11l
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
796
  • 796
97.10
  • 97.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.80e3
  • 1.80e3
  • 2.16e3
  • 2.43e3
93.45
  • 93.45
  • 92.15
  • 91.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.84e3
  • 1.84e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.32e3
  • 3.32e3
  • 9.61e3
87.92
  • 87.92
  • 65.01
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.98e3
  • 3.98e3
85.50
  • 85.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.50e3
  • 5.50e3
  • 1.31e4
79.96
  • 79.96
  • 52.31
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.42
  • 75.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.10e3
  • 7.10e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.16e3
  • 7.16e3
73.91
  • 73.91
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.17e3
  • 7.17e3
73.90
  • 73.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.45e3
  • 8.45e3
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.40e3
  • 9.40e3
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
62.27
  • 62.27
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.77
  • 61.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.95
  • 60.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.90
  • 60.90
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
  • 1.17e4
58.97
  • 58.97
  • 57.45
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.43
  • 58.43
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.51
  • 57.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species3 genesCompare expression
Rodentia2 species4 genesCompare expression
Glires3 species5 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria12 species15 genesCompare expression
Theria13 species16 genesCompare expression
Amniota15 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000053891.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Glires1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000053891.

Cross-references

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