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R. norvegicus Gene: Phf11 - ENSRNOG00000053915 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000053915
NamePhf11
DescriptionPHD finger protein 11 [Source:RGD Symbol;Acc:1310853]
OrganismRattus norvegicus (rat)
Synonym(s)loc100362408, loc361051, phf11a
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.92e3
  • 7.92e3
  • 1.27e4
71.14
  • 71.14
  • 53.56
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.36e3
  • 9.36e3
65.90
  • 65.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
9.62e3
  • 9.62e3
  • 1.01e4
  • 1.58e4
64.96
  • 64.96
  • 63.10
  • 42.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.48
  • 55.48
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.92
  • 54.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.47
  • 54.47
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.32
  • 53.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.22
  • 53.22
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.95
  • 52.95
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.10
  • 51.10
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.18
  • 48.18
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
  • 1.48e4
46.31
  • 46.31
  • 46.04
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
45.10
  • 45.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Amniota14 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000053915.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Glires1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000053915.

Cross-references

EnsemblENSRNOG00000053915 (Phf11)
RGD1310853 (Phf11)
EMBLAABR07018108
Uniprot/SPTREMBLF1LQ59, F1LQ59_RAT

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