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R. norvegicus Gene: Nfatc3 - ENSRNOG00000054264 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000054264
NameNfatc3
Descriptionnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 [Source:RGD Symbol;Acc:1308692]
OrganismRattus norvegicus (rat)
Synonym(s)loc361400, nfat4, nfatc3_predicted
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.44e3
  • 1.44e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.64e3
  • 2.64e3
90.37
  • 90.37
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.09e3
  • 3.09e3
88.75
  • 88.75
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.15e3
  • 3.15e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.88e3
  • 3.88e3
85.87
  • 85.87
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.27e3
  • 4.27e3
84.44
  • 84.44
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.99
  • 83.99
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.53e3
  • 4.53e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.65e3
  • 4.65e3
83.07
  • 83.07
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.74e3
  • 4.74e3
82.73
  • 82.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.49e3
  • 5.49e3
80.02
  • 80.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.59e3
  • 5.59e3
79.64
  • 79.64
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.66e3
  • 5.66e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
5.79e3
  • 5.79e3
  • 5.82e3
  • 6.05e3
78.90
  • 78.90
  • 78.79
  • 77.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.50e3
  • 6.50e3
76.34
  • 76.34
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.18e3
  • 9.18e3
  • 9.64e3
66.55
  • 66.55
  • 64.90
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.54e3
  • 9.54e3
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.22e4
58.25
  • 58.25
  • 55.38
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 1.30e4
52.71
  • 52.71
  • 52.61
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000054264.

Cross-references

EnsemblENSRNOG00000054264 (Nfatc3)
RGD1308692 (Nfatc3)
EMBLAC128800, CH473972
Uniprot/SPTREMBLA0A0G2JTY4, A0A0G2JTY4_RAT, D3ZU59, D3ZU59_RAT

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