R. norvegicus Gene: Ttc23l - ENSRNOG00000055986 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000055986
NameTtc23l
Descriptiontetratricopeptide repeat domain 23-like [Source:MGI Symbol;Acc:MGI:1923027]
OrganismRattus norvegicus (rat)
Synonym(s)4930401a09rik
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
  • 8.23e3
94.84
  • 94.84
  • 70.02
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 2.03e4
38.14
  • 38.14
  • 26.06
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.81e4
  • 1.81e4
34.06
  • 34.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.35
  • 31.35
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.62
  • 27.62
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.04e4
  • 2.04e4
25.86
  • 25.86
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
25.07
  • 25.07
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.18e4
  • 2.18e4
20.67
  • 20.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.31e4
  • 2.31e4
15.80
  • 15.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000055986.

Cross-references

EnsemblENSRNOG00000055986 (Ttc23l)
MGIMGI:1923027 (Ttc23l)
Uniprot/SPTREMBLA0A0G2JYJ8, A0A0G2JYJ8_RAT

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