R. norvegicus Gene: Abcd1 - ENSRNOG00000056524 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000056524
NameAbcd1
DescriptionATP-binding cassette, subfamily D (ALD), member 1 [Source:RGD Symbol;Acc:1562128]
OrganismRattus norvegicus (rat)
Synonym(s)abcd1_predicted, loc363516, rgd1562128

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.53e3
  • 3.53e3
  • 4.76e3
87.12791
  • 87.12791
  • 82.65660
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.47e3
  • 5.47e3
80.04198
  • 80.04198
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.77e3
  • 5.77e3
78.95167
  • 78.95167
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
78.67382
  • 78.67382
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.98e3
  • 5.98e3
78.19371
  • 78.19371
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.39e3
  • 6.39e3
76.68808
  • 76.68808
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.40e3
  • 7.40e3
73.02644
  • 73.02644
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.98e3
  • 7.98e3
70.90039
  • 70.90039
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.25e3
  • 8.25e3
69.92162
  • 69.92162
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.51e3
  • 8.51e3
68.98271
  • 68.98271
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.04e3
  • 9.04e3
67.03523
  • 67.03523
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
66.39165
  • 66.39165
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
66.37488
  • 66.37488
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.98e3
  • 9.98e3
  • 1.14e4
63.62111
  • 63.62111
  • 58.35744
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.31666
  • 63.31666
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.45953
  • 61.45953
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
  • 1.14e4
60.81829
  • 60.81829
  • 58.53675
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.09e4
  • 1.09e4
  • 1.09e4
60.26600
  • 60.26600
  • 60.21549
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
  • 1.36e4
59.46311
  • 59.46311
  • 50.29668
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.43127
  • 59.43127
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
56.02520
  • 56.02520
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAC096338, CH474099
EnsemblENSRNOG00000056524 (Abcd1)
RGD1562128 (Abcd1)
Uniprot/SPTREMBLD3ZHR2, D3ZHR2_RAT

Do not show this banner again