R. norvegicus Gene: Clec16a - ENSRNOG00000057378 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000057378
NameClec16a
DescriptionC-type lectin domain family 16, member A [Source:RGD Symbol;Acc:1305773]
OrganismRattus norvegicus (rat)
Synonym(s)loc287044, rgd1305773

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.03e3
  • 4.03e3
85.30798
  • 85.30798
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.05e3
  • 5.05e3
  • 1.46e4
81.56702
  • 81.56702
  • 46.89062
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.76e3
  • 5.76e3
  • 7.63e3
78.99730
  • 78.99730
  • 72.18467
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
78.65948
  • 78.65948
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.91e3
  • 5.91e3
78.45060
  • 78.45060
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.34e3
  • 6.34e3
  • 1.20e4
76.88409
  • 76.88409
  • 56.14035
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.06e3
  • 7.06e3
74.24488
  • 74.24488
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
73.37210
  • 73.37210
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
73.12087
  • 73.12087
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.08e3
  • 8.08e3
70.53423
  • 70.53423
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.15e3
  • 8.15e3
70.27293
  • 70.27293
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.43e3
  • 8.43e3
69.24014
  • 69.24014
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
67.72357
  • 67.72357
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.00e3
  • 9.00e3
67.17383
  • 67.17383
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.10e3
  • 9.10e3
66.81180
  • 66.81180
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
9.24e3
  • 9.24e3
  • 1.17e4
66.29223
  • 66.29223
  • 57.45785
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.50e3
  • 9.50e3
65.34238
  • 65.34238
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.53715
  • 63.53715
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.60714
  • 62.60714
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.07131
  • 56.07131
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07029067, AABR07072071, AC103514
EnsemblENSRNOG00000057378 (Clec16a)
RGD1305773 (Clec16a)
Uniprot/SPTREMBLA0A0G2KA14, A0A0G2KA14_RAT

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