R. norvegicus Gene: Clec16a - ENSRNOG00000057378 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000057378
NameClec16a
DescriptionC-type lectin domain family 16, member A [Source:RGD Symbol;Acc:1305773]
OrganismRattus norvegicus (rat)
Synonym(s)loc287044, rgd1305773

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.03e3
  • 4.03e3
84.94997
  • 84.94997
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.25e3
  • 5.25e3
80.38567
  • 80.38567
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
76.98954
  • 76.98954
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
74.34972
  • 74.34972
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.71e3
  • 7.71e3
71.18495
  • 71.18495
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
66.93409
  • 66.93409
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.00e3
  • 9.00e3
66.37532
  • 66.37532
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
9.11e3
  • 9.11e3
65.97336
  • 65.97336
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.78e3
  • 9.78e3
63.47183
  • 63.47183
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07029067, AABR07072071, AC103514
EnsemblENSRNOG00000057378 (Clec16a)
RGD1305773 (Clec16a)
Uniprot/SPTREMBLA0A0G2KA14, A0A0G2KA14_RAT

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