R. norvegicus Gene: Copb1 - ENSRNOG00000057623 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000057623
NameCopb1
Descriptioncoatomer protein complex, subunit beta 1 [Source:RGD Symbol;Acc:620861]
OrganismRattus norvegicus (rat)
Synonym(s)copb, rack2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
95.44815
  • 95.44815
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.56e3
  • 1.56e3
94.32965
  • 94.32965
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
94.10949
  • 94.10949
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.66e3
  • 1.66e3
93.93894
  • 93.93894
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
93.90874
  • 93.90874
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.85e3
  • 1.85e3
93.26141
  • 93.26141
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.86e3
  • 1.86e3
93.23558
  • 93.23558
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.88e3
  • 1.88e3
  • 2.65e3
93.16479
  • 93.16479
  • 90.34063
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.13e3
  • 2.13e3
92.24685
  • 92.24685
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
91.83565
  • 91.83565
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.29e3
  • 2.29e3
91.65919
  • 91.65919
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.49e3
  • 2.49e3
90.90885
  • 90.90885
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.49e3
  • 2.49e3
90.90375
  • 90.90375
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.90e3
  • 2.90e3
89.42703
  • 89.42703
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.00e3
  • 3.00e3
89.04592
  • 89.04592
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
88.70139
  • 88.70139
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.11e3
  • 3.11e3
88.66630
  • 88.66630
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.28e3
  • 3.28e3
  • 4.91e3
88.03111
  • 88.03111
  • 82.11190
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.66e3
  • 3.66e3
86.66736
  • 86.66736
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.78e3
  • 3.78e3
  • 7.48e3
86.20166
  • 86.20166
  • 72.73954
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
  • 4.85e3
82.34876
  • 82.34876
  • 82.29704
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC061882, X57228
EnsemblENSRNOG00000057623 (Copb1)
RGD620861 (Copb1)
Uniprot/SWISSPROTCOPB_RAT, P23514

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