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R. norvegicus Gene: LOC102552318 - ENSRNOG00000059303 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000059303
NameLOC102552318
Descriptionactin-like [Source:RGD Symbol;Acc:7506405]
OrganismRattus norvegicus (rat)
Synonym(s)loc683498, loc686149
Orthologs(s)8 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
  • 2.32e3
95.51
  • 95.51
  • 91.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.38
  • 37.38
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 2.00e4
37.02
  • 37.02
  • 27.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
  • 2.28e4
34.81
  • 34.81
  • 17.05
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
32.17
  • 32.17
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.93e4
  • 1.93e4
29.82
  • 29.82
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
27.20
  • 27.20
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
26.83
  • 26.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.28e4
  • 2.28e4
17.06
  • 17.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSRNOG00000059303 (LOC102552318)
RGD7506405 (LOC102552318)
EMBLAC094001
Uniprot/SPTREMBLA0A0G2KAE0, A0A0G2KAE0_RAT

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