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R. norvegicus Gene: Surf4 - ENSRNOG00000060005 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000060005
NameSurf4
Descriptionsurfeit 4 [Source:RGD Symbol;Acc:1561980]
OrganismRattus norvegicus (rat)
Synonym(s)ab1-205, loc100912008, loc296598, m0r7l5, surf1gn
Orthologs(s)6 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
540
  • 540
  • 649
  • 669
98.04
  • 98.04
  • 97.64
  • 97.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
602
  • 602
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
609
  • 609
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
683
  • 683
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
791
  • 791
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
906
  • 906
96.70
  • 96.70
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
988
  • 988
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
95.51
  • 95.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.40e3
  • 1.40e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.41e3
  • 1.41e3
94.88
  • 94.88
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.43e3
  • 1.43e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.54e3
  • 1.54e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.65e3
  • 1.65e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.65e3
  • 1.65e3
93.98
  • 93.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
  • 4.40e3
90.15
  • 90.15
  • 83.98
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
  • 4.26e3
87.50
  • 87.50
  • 84.47
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.63e3
  • 3.63e3
  • 3.76e3
86.79
  • 86.79
  • 86.30
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.69e3
  • 3.69e3
86.58
  • 86.58
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.15e4
58.19
  • 58.19
  • 58.14
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSRNOG00000060005 (Surf4)
RGD1561980 (Surf4), 620527 (Surf1)
EMBLAC126134, AY325150, CH474001
Uniprot/SPTREMBLD4A1D8, D4A1D8_RAT, Q7TP91, Q7TP91_RAT

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