R. norvegicus Gene: Arcn1 - ENSRNOG00000061108 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000061108
NameArcn1
Descriptionarchain 1 [Source:RGD Symbol;Acc:1359110]
OrganismRattus norvegicus (rat)
Synonym(s)copd, mgc94158

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
844
  • 844
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
921
  • 921
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
939
  • 939
96.58
  • 96.58
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
95.54
  • 95.54
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.31e3
  • 1.31e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.33e3
  • 1.33e3
  • 1.50e3
95.14
  • 95.14
  • 94.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
95.05
  • 95.05
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.53e3
  • 1.53e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.54e3
  • 1.54e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.55e3
  • 1.55e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.26
  • 94.26
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.78e3
  • 1.78e3
93.52
  • 93.52
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
93.36
  • 93.36
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.92e3
  • 1.92e3
  • 1.98e3
93.00
  • 93.00
  • 92.78
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.95e3
  • 1.95e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
92.46
  • 92.46
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
  • 3.28e3
92.09
  • 92.09
  • 88.03
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.59e3
  • 4.59e3
  • 7.10e3
83.28
  • 83.28
  • 74.11
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC081979
EnsemblENSRNOG00000061108 (Arcn1)
RGD1359110 (Arcn1)
Uniprot/SWISSPROTCOPD_RAT, Q66H80

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