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R. norvegicus Gene: RGD1561281 - ENSRNOG00000061130 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000061130
NameRGD1561281
Descriptionsimilar to keratin associated protein 2-4 [Source:RGD Symbol;Acc:1561281]
OrganismRattus norvegicus (rat)
Synonym(s)krtap2-1, krtap2-4, loc501719, loc501720, loc501721, loc680136, loc680152, rgd1561281gn,gn rgd1561684, rgd1562309
Orthologs(s)28 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
  • 2.48e4
23.44
  • 23.44
  • 9.65
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
22.31
  • 22.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.27e4
  • 2.27e4
17.35
  • 17.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species4 genesCompare expression
Glires2 species7 genesCompare expression
Euarchontoglires6 species17 genesCompare expression
Boreoeutheria11 species27 genesCompare expression
Theria12 species28 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000061130.

Cross-references

EnsemblENSRNOG00000061130 (RGD1561281)
RGD1561281 (RGD1561281), 1561684 (RGD1561684), 1562309 (Krtap2-4), 1595488 (Krtap2-4l)
EMBLAC099183
Uniprot/SPTREMBLD3ZBD2, D3ZBD2_RAT

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