R. norvegicus Gene: Tubb5 - ENSRNOG00000061216 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000061216
NameTubb5
Descriptiontubulin, beta 5 class I [Source:RGD Symbol;Acc:628596]
OrganismRattus norvegicus (rat)
Synonym(s)p05218, q6p9x8, q8wuc1, q9cy33, tubb

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
125
  • 125
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
151
  • 151
  • 170
99.45
  • 99.45
  • 99.38
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
163
  • 163
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
237
  • 237
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
280
  • 280
98.98
  • 98.98
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
455
  • 455
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
464
  • 464
98.31
  • 98.31
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
525
  • 525
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
607
  • 607
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
625
  • 625
97.72
  • 97.72
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
722
  • 722
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
743
  • 743
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
755
  • 755
97.25
  • 97.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.13e3
  • 1.13e3
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
  • 1.70e3
94.26
  • 94.26
  • 93.81
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.85e3
  • 1.85e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.09e3
  • 2.09e3
92.39
  • 92.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
2.17e3
  • 2.17e3
  • 2.44e3
92.09
  • 92.09
  • 91.12
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
92.03
  • 92.03
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.54e3
  • 2.54e3
  • 2.93e3
90.73
  • 90.73
  • 89.33
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAB011679, BC060540, BX883048
EnsemblENSRNOG00000061216 (Tubb5)
RGD628596 (Tubb5)
Uniprot/SWISSPROTP69897, TBB5_RAT

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