R. norvegicus Gene: Atp2b3 - ENSRNOG00000061304 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000061304
NameAtp2b3
DescriptionATPase, Ca++ transporting, plasma membrane 3 [Source:RGD Symbol;Acc:621304]
OrganismRattus norvegicus (rat)
Synonym(s)pmca3
Orthologs(s)25 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
2.79e3
  • 2.79e3
  • 3.01e3
89.84
  • 89.84
  • 89.05
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.00e3
  • 3.00e3
  • 4.76e3
89.06
  • 89.06
  • 82.67
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.21e3
  • 4.21e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.03e3
  • 6.03e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.67
  • 58.67
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.77
  • 49.77
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.46
  • 48.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.40
  • 48.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
  • 1.55e4
47.49
  • 47.49
  • 43.38
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
44.83
  • 44.83
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.75
  • 40.75
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.36
  • 40.36
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.12
  • 39.12
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
38.68
  • 38.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.81e4
  • 1.81e4
34.05
  • 34.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.92e4
  • 1.92e4
29.89
  • 29.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000061304.

Paralogs (same species)

Cross-references

EnsemblENSRNOG00000061304 (Atp2b3)
RGD621304 (Atp2b3)
EMBLAABR07042450, AABR07042451, AABR07071935
Uniprot/SPTREMBLA0A0G2K9Q6, A0A0G2K9Q6_RAT
Uniprot/SWISSPROTAT2B3_RAT, Q64568

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