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R. norvegicus Gene: Myo1e - ENSRNOG00000061928 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000061928
NameMyo1e
Descriptionmyosin IE [Source:RGD Symbol;Acc:3144]
OrganismRattus norvegicus (rat)
Synonym(s)myr3, myr5
Orthologs(s)17 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.21e3
  • 3.21e3
88.31
  • 88.31
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.39e3
  • 3.39e3
87.64
  • 87.64
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.01e3
  • 4.01e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.07e3
  • 4.07e3
85.16
  • 85.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.80e3
  • 4.80e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.82e3
  • 4.82e3
82.45
  • 82.45
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
4.87e3
  • 4.87e3
  • 5.49e3
  • 6.78e3
82.26
  • 82.26
  • 80.01
  • 75.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.98e3
  • 4.98e3
81.85
  • 81.85
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.04e3
  • 6.04e3
77.99
  • 77.99
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.60e3
  • 6.60e3
75.96
  • 75.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.44e3
  • 7.44e3
72.89
  • 72.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.56e3
  • 7.56e3
72.46
  • 72.46
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.21e3
  • 8.21e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.02e3
  • 9.02e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.05e4
62.46
  • 62.46
  • 61.60
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.61
  • 58.61
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.87
  • 54.87
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.29e4
  • 1.29e4
  • 1.30e4
53.11
  • 53.11
  • 52.68
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.51e4
52.72
  • 52.72
  • 44.89
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000061928.

Paralogs (same species)

Paralogy information comes from OMA : ENSRNOG00000061928.

Cross-references

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