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S. scrofa Gene: PRR13 - ENSSSCG00000000273 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000000273
NamePRR13
Descriptionproline rich 13 [Source:HGNC Symbol;Acc:HGNC:24528]
OrganismSus scrofa (pig)
Synonym(s)dkfzp564j157, flj23818
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
404
  • 404
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
404
  • 404
  • 432
  • 1.73e3
98.29
  • 98.29
  • 98.17
  • 92.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
427
  • 427
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
457
  • 457
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
581
  • 581
  • 704
97.54
  • 97.54
  • 97.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
633
  • 633
  • 1.20e3
  • 2.66e3
97.32
  • 97.32
  • 94.91
  • 88.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
680
  • 680
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
709
  • 709
  • 859
  • 1.24e4
97.00
  • 97.00
  • 96.36
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
770
  • 770
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
869
  • 869
  • 943
  • 1.07e3
96.32
  • 96.32
  • 96.01
  • 95.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.04e3
  • 1.04e3
95.58
  • 95.58
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.13e3
  • 1.13e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
  • 4.76e3
94.19
  • 94.19
  • 79.83
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.46e3
  • 1.46e3
  • 2.39e3
  • 2.90e3
  • 3.09e3
  • 3.88e3
93.83
  • 93.83
  • 89.88
  • 87.70
  • 86.90
  • 83.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.49e3
  • 1.49e3
93.71
  • 93.71
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
93.56
  • 93.56
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.60e3
  • 1.60e3
  • 4.00e3
93.23
  • 93.23
  • 83.06
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.61e3
  • 1.61e3
  • 1.97e3
  • 2.27e3
  • 2.45e3
93.19
  • 93.19
  • 91.67
  • 90.37
  • 89.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.76e3
  • 1.76e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.89e3
  • 1.89e3
  • 2.11e3
  • 3.82e3
92.00
  • 92.00
  • 91.07
  • 83.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.06e3
  • 2.06e3
  • 2.19e3
91.27
  • 91.27
  • 90.72
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.14e3
  • 2.14e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
2.19e3
  • 2.19e3
  • 2.60e3
90.73
  • 90.73
  • 88.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.23e3
  • 2.23e3
  • 2.35e3
  • 2.51e3
90.56
  • 90.56
  • 90.03
  • 89.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
2.24e3
  • 2.24e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.27e3
  • 2.27e3
  • 5.32e3
90.40
  • 90.40
  • 77.46
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.32e3
  • 2.32e3
90.17
  • 90.17
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.48e3
  • 2.48e3
89.50
  • 89.50
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
2.49e3
  • 2.49e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.59e3
  • 2.59e3
89.01
  • 89.01
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
2.63e3
  • 2.63e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.67e3
  • 2.67e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.94e3
  • 2.94e3
87.53
  • 87.53
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
3.00e3
  • 3.00e3
87.28
  • 87.28
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.20e3
  • 3.20e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
3.36e3
  • 3.36e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
3.44e3
  • 3.44e3
85.40
  • 85.40
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
3.61e3
  • 3.61e3
84.70
  • 84.70
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
3.72e3
  • 3.72e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
3.91e3
  • 3.91e3
83.45
  • 83.45
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.94e3
  • 3.94e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
4.81e3
  • 4.81e3
79.61
  • 79.61
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
5.89e3
  • 5.89e3
75.03
  • 75.03
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
6.30e3
  • 6.30e3
73.29
  • 73.29
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.38e3
  • 6.38e3
72.97
  • 72.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000000273.

Cross-references

EnsemblENSSSCG00000000273 (PRR13)
HGNCHGNC:24528 (PRR13)
EMBLCU928648
Uniprot/SPTREMBLF1SFQ6, F1SFQ6_PIG

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