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S. scrofa Gene: SYT10 - ENSSSCG00000000527 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000000527
NameSYT10
Descriptionsynaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.93e3
  • 7.93e3
66.37
  • 66.37
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.35
  • 57.35
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.63
  • 53.63
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.10e4
  • 1.10e4
53.21
  • 53.21
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.34
  • 51.34
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.46
  • 48.46
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.46
  • 47.46
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
44.34
  • 44.34
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.35
  • 42.35
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
  • 1.54e4
  • 1.61e4
  • 1.65e4
37.02
  • 37.02
  • 34.65
  • 31.74
  • 30.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
33.76
  • 33.76
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
32.92
  • 32.92
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
30.35
  • 30.35
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.64e4
  • 1.64e4
30.32
  • 30.32
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.65e4
  • 1.65e4
30.25
  • 30.25
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
29.83
  • 29.83
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 1.95e4
22.05
  • 22.05
  • 17.30
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.85e4
  • 1.85e4
21.38
  • 21.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
17.60
  • 17.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000000527.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000000527.

Cross-references

EnsemblENSSSCG00000000527 (SYT10)
HGNCHGNC:19266 (SYT10)
EMBLCU463015
Uniprot/SPTREMBLF1SGD3, F1SGD3_PIG

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