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S. scrofa Gene: LRRIQ1 - ENSSSCG00000000934 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000000934
NameLRRIQ1
Descriptionleucine-rich repeats and IQ motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25708]
OrganismSus scrofa (pig)
Synonym(s)flj12303, kiaa1801
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
983
  • 983
  • 4.81e3
95.84
  • 95.84
  • 79.63
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.15e3
  • 5.15e3
  • 1.25e4
  • 1.35e4
78.16
  • 78.16
  • 46.81
  • 42.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
7.82e3
  • 7.82e3
  • 1.33e4
  • 1.52e4
66.87
  • 66.87
  • 43.63
  • 35.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.92e3
  • 8.92e3
62.18
  • 62.18
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
9.20e3
  • 9.20e3
61.02
  • 61.02
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.46e4
54.62
  • 54.62
  • 37.95
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.80
  • 53.80
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.10e4
  • 1.10e4
53.39
  • 53.39
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.48e4
52.80
  • 52.80
  • 37.11
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
48.00
  • 48.00
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
47.37
  • 47.37
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.29e4
  • 1.29e4
  • 1.56e4
  • 1.64e4
  • 1.67e4
45.39
  • 45.39
  • 33.83
  • 30.60
  • 29.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.15
  • 45.15
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
44.83
  • 44.83
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.92
  • 42.92
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.78
  • 42.78
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.41e4
  • 1.41e4
40.28
  • 40.28
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.66e4
  • 1.70e4
  • 1.82e4
  • 1.86e4
40.10
  • 40.10
  • 29.67
  • 27.77
  • 23.00
  • 21.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.46e4
  • 1.46e4
38.14
  • 38.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
1.49e4
  • 1.49e4
36.97
  • 36.97
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
35.63
  • 35.63
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
35.10
  • 35.10
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
32.05
  • 32.05
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
31.08
  • 31.08
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.79e4
30.99
  • 30.99
  • 24.23
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.66e4
  • 1.66e4
29.68
  • 29.68
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
27.61
  • 27.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
  • 2.16e4
22.53
  • 22.53
  • 8.32
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.88e4
  • 1.88e4
  • 2.06e4
20.37
  • 20.37
  • 12.74
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000000934.

Cross-references

EnsemblENSSSCG00000000934 (LRRIQ1)
HGNCHGNC:25708 (LRRIQ1)
EMBLFP102681
Uniprot/SPTREMBLF1SPX1, F1SPX1_PIG

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