S. scrofa Gene: DDX39B - ENSSSCG00000001400 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000001400
NameDDX39B
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:HGNC Symbol;Acc:HGNC:13917]
OrganismSus scrofa (pig)
Synonym(s)bat1, d6s81e, uap56

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
187
  • 187
  • 676
99.20109
  • 99.20109
  • 97.09652
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
219
  • 219
99.06362
  • 99.06362
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
229
  • 229
99.02009
  • 99.02009
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
308
  • 308
  • 667
98.67946
  • 98.67946
  • 97.13524
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
325
  • 325
98.60539
  • 98.60539
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
417
  • 417
  • 1.28e3
  • 1.32e3
98.21086
  • 98.21086
  • 94.48069
  • 94.34360
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
547
  • 547
  • 644
97.65141
  • 97.65141
  • 97.23228
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
562
  • 562
  • 723
  • 1.31e3
97.58667
  • 97.58667
  • 96.89298
  • 94.37134
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
605
  • 605
97.40386
  • 97.40386
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
736
  • 736
96.83753
  • 96.83753
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
760
  • 760
96.73641
  • 96.73641
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
784
  • 784
96.63197
  • 96.63197
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
800
  • 800
96.56306
  • 96.56306
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
805
  • 805
96.54366
  • 96.54366
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
830
  • 830
96.43617
  • 96.43617
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
833
  • 833
  • 1.42e3
  • 2.06e3
96.42120
  • 96.42120
  • 93.90231
  • 91.14763
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
889
  • 889
96.17847
  • 96.17847
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
901
  • 901
96.12792
  • 96.12792
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
931
  • 931
96.00172
  • 96.00172
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
950
  • 950
95.91879
  • 95.91879
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.00e3
  • 1.00e3
95.68875
  • 95.68875
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.07e3
  • 1.07e3
95.41883
  • 95.41883
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.09e3
  • 1.09e3
95.31758
  • 95.31758
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.12e3
  • 1.12e3
95.20668
  • 95.20668
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.13e3
  • 1.13e3
  • 1.74e3
95.16277
  • 95.16277
  • 92.50688
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.18e3
  • 1.18e3
  • 1.37e3
94.93720
  • 94.93720
  • 94.10242
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.20e3
  • 1.20e3
94.86197
  • 94.86197
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.21e3
  • 1.21e3
94.79508
  • 94.79508
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.23e3
  • 1.23e3
94.73086
  • 94.73086
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.24e3
  • 1.24e3
94.66599
  • 94.66599
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
94.12805
  • 94.12805
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.38e3
  • 1.38e3
94.07497
  • 94.07497
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
1.43e3
  • 1.43e3
93.85035
  • 93.85035
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.44e3
  • 1.44e3
93.78949
  • 93.78949
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.50e3
  • 1.50e3
93.55308
  • 93.55308
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.72e3
  • 1.72e3
92.58857
  • 92.58857
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
2.20e3
  • 2.20e3
90.53682
  • 90.53682
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
3.86e3
  • 3.86e3
83.40933
  • 83.40933
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAJ251914, CU467793, EU282340, Z34846
EnsemblENSSSCG00000001400 (DDX39B)
HGNCHGNC:13917 (DDX39B)
Uniprot/SPTREMBLB9TSQ2, B9TSQ2_PIG, K7GT57, K7GT57_PIG
Uniprot/SWISSPROTDX39B_PIG, Q29024

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