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S. scrofa Gene: - ENSSSCG00000001463 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000001463
Name-
Description-
OrganismSus scrofa (pig)
Synonym(s)loc100520085, psmb9gn
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.64e3
  • 1.64e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
2.22e3
  • 2.22e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.29e3
  • 2.29e3
  • 2.75e3
  • 5.95e3
90.31
  • 90.31
  • 88.33
  • 74.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
2.37e3
  • 2.37e3
89.97
  • 89.97
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
3.15e3
  • 3.15e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
3.31e3
  • 3.31e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
3.55e3
  • 3.55e3
  • 7.89e3
  • 1.06e4
84.94
  • 84.94
  • 66.55
  • 54.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
4.28e3
  • 4.28e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
4.67e3
  • 4.67e3
80.19
  • 80.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
4.90e3
  • 4.90e3
  • 9.47e3
  • 1.10e4
79.21
  • 79.21
  • 59.86
  • 53.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.42e3
  • 5.42e3
77.01
  • 77.01
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
5.80e3
  • 5.80e3
75.42
  • 75.42
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
6.79e3
  • 6.79e3
  • 1.09e4
71.24
  • 71.24
  • 53.68
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
7.66e3
  • 7.66e3
  • 1.01e4
  • 1.24e4
67.52
  • 67.52
  • 57.21
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
7.70e3
  • 7.70e3
67.38
  • 67.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
  • 9.54e3
  • 1.00e4
64.99
  • 64.99
  • 59.55
  • 57.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.33e3
  • 8.33e3
  • 8.72e3
  • 1.36e4
64.69
  • 64.69
  • 63.06
  • 42.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
9.15e3
  • 9.15e3
  • 1.25e4
61.21
  • 61.21
  • 47.20
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
9.35e3
  • 9.35e3
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
9.74e3
  • 9.74e3
58.70
  • 58.70
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.00e4
  • 1.00e4
57.54
  • 57.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.34e4
57.20
  • 57.20
  • 43.31
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
55.02
  • 55.02
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
  • 1.41e4
  • 1.42e4
  • 1.44e4
47.47
  • 47.47
  • 40.09
  • 39.73
  • 39.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.61e4
47.35
  • 47.35
  • 31.90
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
46.95
  • 46.95
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.18
  • 45.18
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.71
  • 44.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
44.48
  • 44.48
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
  • 1.45e4
  • 1.46e4
  • 1.68e4
38.61
  • 38.61
  • 38.43
  • 38.29
  • 28.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.48e4
  • 1.48e4
37.44
  • 37.44
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.49e4
  • 1.49e4
36.77
  • 36.77
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
34.11
  • 34.11
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.56e4
  • 1.56e4
33.78
  • 33.78
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.60e4
  • 1.60e4
32.15
  • 32.15
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.67e4
  • 1.67e4
29.13
  • 29.13
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.70e4
  • 1.70e4
28.03
  • 28.03
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
24.16
  • 24.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000001463.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000001463.

Cross-references

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