S. scrofa Gene: LRRC73 - ENSSSCG00000001676 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000001676
NameLRRC73
Descriptionleucine rich repeat containing 73 [Source:HGNC Symbol;Acc:HGNC:21375]
OrganismSus scrofa (pig)
Synonym(s)c6orf154, dj337h4.2
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.07e3
  • 3.07e3
  • 1.17e4
86.98
  • 86.98
  • 50.36
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.34e3
  • 3.34e3
  • 9.18e3
85.86
  • 85.86
  • 61.09
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.18e3
  • 4.18e3
  • 4.78e3
  • 5.09e3
  • 6.69e3
82.30
  • 82.30
  • 79.75
  • 78.41
  • 71.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
6.00e3
  • 6.00e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
69.93
  • 69.93
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
8.41e3
  • 8.41e3
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
59.59
  • 59.59
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.63
  • 55.63
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
54.08
  • 54.08
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
  • 1.59e4
47.58
  • 47.58
  • 32.80
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.56e4
47.51
  • 47.51
  • 33.68
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.29e4
  • 1.56e4
47.30
  • 47.30
  • 45.28
  • 34.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
47.08
  • 47.08
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
46.95
  • 46.95
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
44.29
  • 44.29
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
44.21
  • 44.21
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.66
  • 43.66
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.60e4
42.78
  • 42.78
  • 32.04
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
42.01
  • 42.01
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.39e4
  • 1.39e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
39.15
  • 39.15
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
38.28
  • 38.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
35.28
  • 35.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.56e4
  • 1.56e4
34.08
  • 34.08
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
33.76
  • 33.76
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.58e4
  • 1.58e4
  • 1.62e4
33.05
  • 33.05
  • 31.25
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
32.85
  • 32.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
  • 1.76e4
  • 1.77e4
30.51
  • 30.51
  • 25.46
  • 25.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 1.72e4
  • 1.79e4
30.50
  • 30.50
  • 26.98
  • 24.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.68e4
  • 1.68e4
28.94
  • 28.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
17.60
  • 17.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000001676.

Cross-references

EnsemblENSSSCG00000001676 (LRRC73)
HGNCHGNC:21375 (LRRC73)
EMBLCU928765
Uniprot/SPTREMBLF1RRL3, F1RRL3_PIG

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