S. scrofa Gene: RASGRF1 - ENSSSCG00000001771 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000001771
NameRASGRF1
DescriptionRas protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
OrganismSus scrofa (pig)
Synonym(s)cdc25, cdc25l, gnrp, grf1, grf55, h-grf55, pp13187
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.80e3
  • 1.80e3
  • 4.53e3
92.39
  • 92.39
  • 80.81
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.54e3
  • 2.54e3
  • 2.86e3
  • 3.84e3
  • 4.89e3
89.25
  • 89.25
  • 87.88
  • 83.74
  • 79.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.67e3
  • 2.67e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.69e3
  • 2.69e3
88.58
  • 88.58
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
3.65e3
  • 3.65e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.77e3
  • 3.77e3
  • 6.42e3
84.04
  • 84.04
  • 72.78
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
5.02e3
  • 5.02e3
78.73
  • 78.73
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
5.51e3
  • 5.51e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
6.19e3
  • 6.19e3
73.75
  • 73.75
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.80e3
  • 7.80e3
66.95
  • 66.95
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.35e3
  • 9.35e3
60.35
  • 60.35
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
9.77e3
  • 9.77e3
58.58
  • 58.58
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.82
  • 54.82
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
43.03
  • 43.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.72e4
33.44
  • 33.44
  • 27.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
31.14
  • 31.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
  • 1.71e4
30.83
  • 30.83
  • 27.55
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
29.59
  • 29.59
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
  • 1.82e4
28.71
  • 28.71
  • 23.05
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.69e4
  • 1.69e4
28.42
  • 28.42
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
27.72
  • 27.72
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.74e4
  • 1.74e4
26.08
  • 26.08
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.76e4
  • 1.76e4
25.32
  • 25.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.78e4
  • 1.78e4
  • 1.82e4
  • 1.85e4
24.58
  • 24.58
  • 22.92
  • 21.42
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000001771.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000001771.

Cross-references

EnsemblENSSSCG00000001771 (RASGRF1)
HGNCHGNC:9875 (RASGRF1)
EMBLCT955991, CU326382
Uniprot/SPTREMBLF1RKR6, F1RKR6_PIG

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