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S. scrofa Gene: CDH24 - ENSSSCG00000002037 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000002037
NameCDH24
Descriptioncadherin 24, type 2 [Source:HGNC Symbol;Acc:HGNC:14265]
OrganismSus scrofa (pig)
Orthologs(s)14 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018685nursing stage
6.73e3
  • 6.73e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.01e3
  • 7.01e3
70.30
  • 70.30
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.35e3
  • 7.35e3
68.87
  • 68.87
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
8.89e3
  • 8.89e3
  • 1.26e4
62.33
  • 62.33
  • 46.68
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.93e3
  • 8.93e3
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
9.08e3
  • 9.08e3
  • 1.06e4
  • 1.30e4
61.51
  • 61.51
  • 54.93
  • 44.76
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
9.14e3
  • 9.14e3
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.89e3
  • 9.89e3
58.08
  • 58.08
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
9.94e3
  • 9.94e3
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
  • 1.04e4
  • 1.04e4
  • 1.24e4
56.13
  • 56.13
  • 56.07
  • 55.87
  • 47.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.65
  • 55.65
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.37
  • 55.37
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.10e4
  • 1.10e4
53.54
  • 53.54
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.11e4
  • 1.11e4
52.74
  • 52.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.29e4
  • 1.45e4
51.27
  • 51.27
  • 45.22
  • 38.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
49.96
  • 49.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.32e4
47.93
  • 47.93
  • 44.17
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.36e4
47.51
  • 47.51
  • 42.56
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.27e4
  • 1.27e4
46.03
  • 46.03
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
  • 1.28e4
  • 1.42e4
  • 1.45e4
  • 1.61e4
45.81
  • 45.81
  • 45.56
  • 39.74
  • 38.39
  • 31.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
  • 1.37e4
45.72
  • 45.72
  • 42.10
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.31e4
  • 1.31e4
44.57
  • 44.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
42.20
  • 42.20
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.40e4
  • 1.40e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
37.21
  • 37.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.51e4
36.24
  • 36.24
  • 36.15
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
33.55
  • 33.55
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.57e4
  • 1.57e4
33.44
  • 33.44
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.57e4
  • 1.57e4
33.44
  • 33.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000002037.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata8 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000002037.

Cross-references

EnsemblENSSSCG00000002037 (CDH24)
EMBLCU468526
Uniprot/SPTREMBLF1S9C8, F1S9C8_PIG

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