S. scrofa Gene: CCDC177 - ENSSSCG00000002310 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000002310
NameCCDC177
Descriptioncoiled-coil domain containing 177 [Source:HGNC Symbol;Acc:HGNC:23243]
OrganismSus scrofa (pig)
Synonym(s)c14orf162, plpl
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
49.34
  • 49.34
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
  • 1.23e4
  • 1.28e4
  • 1.49e4
48.86
  • 48.86
  • 47.88
  • 45.58
  • 37.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
42.34
  • 42.34
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.48e4
  • 1.48e4
37.39
  • 37.39
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
33.44
  • 33.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000002310.

Cross-references

EnsemblENSSSCG00000002310 (CCDC177)
HGNCHGNC:23243 (CCDC177)
EMBLCT737420
Uniprot/SPTREMBLF1S4B4, F1S4B4_PIG

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