S. scrofa Gene: TDRD9 - ENSSSCG00000002552 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000002552
NameTDRD9
Descriptiontudor domain containing 9 [Source:HGNC Symbol;Acc:HGNC:20122]
OrganismSus scrofa (pig)
Synonym(s)c14orf75, dkfzp434n0820, flj36164, net54
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
5.19e3
  • 5.19e3
  • 7.41e3
77.99
  • 77.99
  • 68.60
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
7.73e3
  • 7.73e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.79e4
  • 1.81e4
50.18
  • 50.18
  • 24.04
  • 23.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.57e4
  • 1.84e4
49.72
  • 49.72
  • 33.45
  • 21.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.51
  • 47.51
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
37.70
  • 37.70
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
35.70
  • 35.70
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.60e4
  • 1.60e4
  • 1.71e4
32.06
  • 32.06
  • 27.60
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.81e4
31.01
  • 31.01
  • 23.26
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.64e4
  • 1.64e4
30.40
  • 30.40
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.73e4
  • 1.73e4
26.81
  • 26.81
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 1.88e4
26.78
  • 26.78
  • 20.38
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
23.96
  • 23.96
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
  • 1.83e4
  • 1.88e4
  • 1.98e4
23.51
  • 23.51
  • 22.27
  • 20.31
  • 16.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
21.87
  • 21.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000002552.

Cross-references

EnsemblENSSSCG00000002552 (TDRD9)
HGNCHGNC:20122 (TDRD9)
EMBLCU693433
Uniprot/SPTREMBLF1S9V4, F1S9V4_PIG

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