S. scrofa Gene: - ENSSSCG00000002997 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000002997
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.33e3
  • 6.33e3
73.17
  • 73.17
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
7.14e3
  • 7.14e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.78e3
  • 8.78e3
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
9.57e3
  • 9.57e3
59.42
  • 59.42
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.24e4
55.69
  • 55.69
  • 55.31
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.62e4
  • 1.69e4
  • 1.88e4
55.02
  • 55.02
  • 31.40
  • 28.41
  • 20.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.06e4
  • 1.06e4
54.91
  • 54.91
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.10e4
  • 1.10e4
53.34
  • 53.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
  • 1.87e4
  • 2.06e4
51.14
  • 51.14
  • 20.90
  • 12.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
49.82
  • 49.82
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
48.05
  • 48.05
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.25e4
  • 1.25e4
  • 1.51e4
  • 1.55e4
47.11
  • 47.11
  • 36.18
  • 34.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
  • 1.42e4
45.98
  • 45.98
  • 39.65
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.32e4
  • 1.68e4
  • 1.92e4
45.07
  • 45.07
  • 44.04
  • 28.79
  • 18.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.56e4
  • 1.59e4
42.99
  • 42.99
  • 34.08
  • 32.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.81
  • 42.81
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.46
  • 40.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
40.22
  • 40.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
40.14
  • 40.14
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.57e4
39.80
  • 39.80
  • 33.25
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
38.60
  • 38.60
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.47e4
  • 1.47e4
37.58
  • 37.58
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.55e4
  • 1.85e4
36.14
  • 36.14
  • 34.31
  • 21.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
36.04
  • 36.04
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
35.80
  • 35.80
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.57e4
  • 1.57e4
33.27
  • 33.27
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.58e4
  • 1.58e4
33.03
  • 33.03
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
32.58
  • 32.58
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.71e4
  • 1.71e4
27.61
  • 27.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
24.24
  • 24.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.86e4
  • 1.86e4
21.30
  • 21.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.87e4
  • 1.87e4
20.65
  • 20.65
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
19.19
  • 19.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Amniota12 species13 genesCompare expression
Tetrapoda13 species14 genesCompare expression
Euteleostomi14 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000002997.

Cross-references

EnsemblENSSSCG00000002997
EMBLFP325213
Uniprot/SPTREMBLF1RHB8, F1RHB8_PIG

Do not show this banner again