S. scrofa Gene: HP1BP3 - ENSSSCG00000003511 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000003511
NameHP1BP3
Descriptionheterochromatin protein 1, binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24973]
OrganismSus scrofa (pig)
Synonym(s)hp1-bp74
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
1.20e3
  • 1.20e3
  • 1.69e3
  • 2.40e3
94.91
  • 94.91
  • 92.86
  • 89.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.37e3
  • 1.37e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.43e3
  • 1.43e3
  • 1.47e3
  • 2.20e3
93.93
  • 93.93
  • 93.77
  • 90.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.60e3
  • 1.60e3
93.22
  • 93.22
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.63e3
  • 1.63e3
93.11
  • 93.11
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.66e3
  • 1.66e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.67e3
  • 1.67e3
  • 1.88e3
  • 1.97e3
92.92
  • 92.92
  • 92.04
  • 91.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.70e3
  • 1.70e3
  • 2.82e3
92.80
  • 92.80
  • 88.05
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.72e3
  • 1.72e3
92.71
  • 92.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.75e3
  • 1.75e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.88e3
  • 1.88e3
  • 2.34e3
  • 3.01e3
92.03
  • 92.03
  • 90.09
  • 87.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.92e3
  • 1.92e3
91.88
  • 91.88
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.93e3
  • 1.93e3
91.84
  • 91.84
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.94e3
  • 1.94e3
91.78
  • 91.78
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.98e3
  • 1.98e3
91.60
  • 91.60
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
2.04e3
  • 2.04e3
91.36
  • 91.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.05e3
  • 2.05e3
  • 2.81e3
91.33
  • 91.33
  • 88.08
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
2.06e3
  • 2.06e3
  • 2.09e3
91.26
  • 91.26
  • 91.15
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
2.07e3
  • 2.07e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.13e3
  • 2.13e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.14e3
  • 2.14e3
90.93
  • 90.93
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
90.88
  • 90.88
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.16e3
  • 2.16e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
2.16e3
  • 2.16e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 2.29e3
  • 2.36e3
  • 2.67e3
90.68
  • 90.68
  • 90.30
  • 89.98
  • 88.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.22e3
  • 2.22e3
  • 3.10e3
90.60
  • 90.60
  • 86.88
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.26e3
  • 2.26e3
  • 2.57e3
90.41
  • 90.41
  • 89.13
AEIR
  • AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.30e3
  • 2.30e3
90.25
  • 90.25
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.32e3
  • 2.32e3
  • 2.42e3
  • 2.58e3
  • 2.70e3
  • 3.02e3
90.17
  • 90.17
  • 89.75
  • 89.05
  • 88.58
  • 87.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.33e3
  • 2.33e3
90.12
  • 90.12
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
2.34e3
  • 2.34e3
90.07
  • 90.07
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.35e3
  • 2.35e3
90.06
  • 90.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.36e3
  • 2.36e3
  • 2.60e3
  • 3.14e3
90.00
  • 90.00
  • 88.98
  • 86.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
2.39e3
  • 2.39e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
2.40e3
  • 2.40e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
2.47e3
  • 2.47e3
89.54
  • 89.54
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.48e3
  • 2.48e3
89.48
  • 89.48
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
2.53e3
  • 2.53e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
2.59e3
  • 2.59e3
  • 2.65e3
89.02
  • 89.02
  • 88.75
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
2.63e3
  • 2.63e3
  • 2.69e3
  • 1.24e4
88.84
  • 88.84
  • 88.62
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
2.65e3
  • 2.65e3
88.76
  • 88.76
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
2.74e3
  • 2.74e3
88.40
  • 88.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
2.74e3
  • 2.74e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
2.90e3
  • 2.90e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
3.02e3
  • 3.02e3
87.20
  • 87.20
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
3.41e3
  • 3.41e3
85.56
  • 85.56
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
3.54e3
  • 3.54e3
84.98
  • 84.98
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
5.15e3
  • 5.15e3
78.17
  • 78.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000003511.

Cross-references

EnsemblENSSSCG00000003511 (HP1BP3)
HGNCHGNC:24973 (HP1BP3)
EMBLFP243370
Uniprot/SPTREMBLF1SU06, F1SU06_PIG

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