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S. scrofa Gene: ZMYM4 - ENSSSCG00000003627 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000003627
NameZMYM4
Descriptionzinc finger, MYM-type 4 [Source:HGNC Symbol;Acc:HGNC:13055]
OrganismSus scrofa (pig)
Synonym(s)kiaa0425, mym, znf198l3, znf262
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.59e3
  • 1.59e3
  • 8.69e3
93.25
  • 93.25
  • 63.18
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
2.72e3
  • 2.72e3
  • 7.90e3
  • 1.06e4
88.48
  • 88.48
  • 66.52
  • 55.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
2.98e3
  • 2.98e3
87.37
  • 87.37
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.55e3
  • 3.55e3
  • 1.16e4
  • 1.24e4
84.94
  • 84.94
  • 50.91
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
3.61e3
  • 3.61e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
3.72e3
  • 3.72e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.74e3
  • 3.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.75e3
  • 3.75e3
  • 1.17e4
84.11
  • 84.11
  • 50.40
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.81e3
  • 3.81e3
  • 1.01e4
83.84
  • 83.84
  • 57.05
AEIR
  • AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
3.84e3
  • 3.84e3
83.74
  • 83.74
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
4.04e3
  • 4.04e3
82.87
  • 82.87
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
4.13e3
  • 4.13e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
4.14e3
  • 4.14e3
82.45
  • 82.45
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
4.40e3
  • 4.40e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.45e3
  • 4.45e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
4.46e3
  • 4.46e3
  • 9.39e3
81.11
  • 81.11
  • 60.22
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
4.63e3
  • 4.63e3
  • 4.74e3
  • 8.18e3
  • 8.22e3
  • 9.61e3
80.38
  • 80.38
  • 79.93
  • 65.33
  • 65.16
  • 59.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
4.64e3
  • 4.64e3
  • 6.65e3
80.35
  • 80.35
  • 71.81
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
4.68e3
  • 4.68e3
80.16
  • 80.16
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
4.74e3
  • 4.74e3
79.90
  • 79.90
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
4.83e3
  • 4.83e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
4.83e3
  • 4.83e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.96e3
  • 4.96e3
  • 8.88e3
  • 9.30e3
78.99
  • 78.99
  • 62.35
  • 60.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.98e3
  • 4.98e3
  • 8.59e3
  • 9.98e3
78.88
  • 78.88
  • 63.59
  • 57.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
5.22e3
  • 5.22e3
77.86
  • 77.86
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.26e3
  • 6.26e3
73.46
  • 73.46
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.31e3
  • 6.31e3
73.27
  • 73.27
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
6.33e3
  • 6.33e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
6.53e3
  • 6.53e3
72.33
  • 72.33
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
6.66e3
  • 6.66e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
6.82e3
  • 6.82e3
71.09
  • 71.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
  • 9.17e3
  • 1.06e4
70.59
  • 70.59
  • 61.12
  • 55.13
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
7.00e3
  • 7.00e3
70.34
  • 70.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
7.13e3
  • 7.13e3
69.77
  • 69.77
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
7.36e3
  • 7.36e3
68.80
  • 68.80
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
7.48e3
  • 7.48e3
  • 8.05e3
  • 1.08e4
68.28
  • 68.28
  • 65.87
  • 54.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
8.04e3
  • 8.04e3
65.93
  • 65.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.40e3
  • 8.40e3
  • 9.47e3
  • 9.95e3
  • 1.03e4
64.40
  • 64.40
  • 59.85
  • 57.82
  • 56.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
8.59e3
  • 8.59e3
63.57
  • 63.57
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
8.65e3
  • 8.65e3
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.54e3
  • 9.54e3
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.76e3
  • 9.76e3
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.99e3
  • 9.99e3
57.64
  • 57.64
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.07e4
56.27
  • 56.27
  • 54.61
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.06e4
  • 1.06e4
55.21
  • 55.21
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.17e4
  • 1.17e4
50.46
  • 50.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000003627.

Cross-references

EnsemblENSSSCG00000003627 (ZMYM4)
HGNCHGNC:13055 (ZMYM4)
EMBLCU062523
Uniprot/SPTREMBLF1SV66, F1SV66_PIG

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