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S. scrofa Gene: NT5C1A - ENSSSCG00000003662 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000003662
NameNT5C1A
Description5'-nucleotidase, cytosolic IA [Source:HGNC Symbol;Acc:HGNC:17819]
OrganismSus scrofa (pig)
Synonym(s)cn-i, cn-ia, cn1, cn1a, mgc119199, mgc119201
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.25e3
  • 1.25e3
  • 1.67e3
  • 4.59e3
94.73
  • 94.73
  • 92.95
  • 80.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.75e3
  • 1.75e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
1.99e3
  • 1.99e3
  • 2.35e3
  • 3.79e3
  • 5.79e3
  • 1.08e4
91.55
  • 91.55
  • 90.04
  • 83.94
  • 75.45
  • 54.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
2.14e3
  • 2.14e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
3.12e3
  • 3.12e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
5.63e3
  • 5.63e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
7.37e3
  • 7.37e3
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
9.65e3
  • 9.65e3
  • 1.04e4
  • 1.05e4
  • 1.10e4
59.11
  • 59.11
  • 55.74
  • 55.50
  • 53.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.33
  • 55.33
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.16e4
  • 1.16e4
50.90
  • 50.90
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
50.19
  • 50.19
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.26e4
49.46
  • 49.46
  • 46.71
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.64
  • 43.64
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
43.22
  • 43.22
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
  • 1.41e4
40.45
  • 40.45
  • 40.44
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
37.69
  • 37.69
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
37.56
  • 37.56
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.67e4
  • 1.67e4
29.42
  • 29.42
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.00
  • 29.00
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 1.89e4
26.54
  • 26.54
  • 19.93
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.92e4
  • 1.92e4
  • 2.06e4
18.51
  • 18.51
  • 12.74
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
  • 2.18e4
16.70
  • 16.70
  • 7.71
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.98e4
  • 1.98e4
15.92
  • 15.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000003662.

Cross-references

EnsemblENSSSCG00000003662 (NT5C1A)
HGNCHGNC:17819 (NT5C1A)
EMBLCR956427
Uniprot/SPTREMBLF1SV04, F1SV04_PIG

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