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S. scrofa Gene: NUP43 - ENSSSCG00000004105 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000004105
NameNUP43
Descriptionnucleoporin 43kDa [Source:HGNC Symbol;Acc:HGNC:21182]
OrganismSus scrofa (pig)
Synonym(s)ba350j20.1, flj13287
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
3.15e3
  • 3.15e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.44e3
  • 3.44e3
  • 7.12e3
85.44
  • 85.44
  • 69.84
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.51e3
  • 3.51e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.89e3
  • 3.89e3
83.50
  • 83.50
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
6.04e3
  • 6.04e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.37e3
  • 6.37e3
  • 6.81e3
  • 8.37e3
72.99
  • 72.99
  • 71.13
  • 64.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
6.45e3
  • 6.45e3
72.65
  • 72.65
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
6.89e3
  • 6.89e3
70.79
  • 70.79
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
7.29e3
  • 7.29e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.30e3
  • 7.30e3
69.05
  • 69.05
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.35e3
  • 7.35e3
  • 7.48e3
  • 7.88e3
  • 8.03e3
  • 9.03e3
68.85
  • 68.85
  • 68.29
  • 66.59
  • 65.95
  • 61.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
7.62e3
  • 7.62e3
  • 8.25e3
  • 1.24e4
67.71
  • 67.71
  • 65.02
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 8.61e3
66.27
  • 66.27
  • 63.49
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
7.97e3
  • 7.97e3
  • 8.94e3
  • 9.66e3
66.23
  • 66.23
  • 62.09
  • 59.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
8.00e3
  • 8.00e3
  • 9.24e3
  • 1.02e4
66.09
  • 66.09
  • 60.84
  • 56.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
8.10e3
  • 8.10e3
65.68
  • 65.68
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
8.11e3
  • 8.11e3
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.25e3
  • 8.25e3
  • 9.22e3
65.02
  • 65.02
  • 60.94
AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
8.41e3
  • 8.41e3
64.37
  • 64.37
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.73e3
  • 8.73e3
62.98
  • 62.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
8.80e3
  • 8.80e3
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
8.91e3
  • 8.91e3
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
8.92e3
  • 8.92e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
8.97e3
  • 8.97e3
  • 9.62e3
  • 9.95e3
62.00
  • 62.00
  • 59.22
  • 57.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
9.01e3
  • 9.01e3
61.81
  • 61.81
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
9.13e3
  • 9.13e3
61.31
  • 61.31
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
9.14e3
  • 9.14e3
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
9.16e3
  • 9.16e3
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
9.17e3
  • 9.17e3
  • 1.09e4
61.13
  • 61.13
  • 53.97
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
9.22e3
  • 9.22e3
60.91
  • 60.91
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
60.75
  • 60.75
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.28e3
  • 9.28e3
60.68
  • 60.68
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
9.28e3
  • 9.28e3
60.65
  • 60.65
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
9.43e3
  • 9.43e3
60.03
  • 60.03
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
9.51e3
  • 9.51e3
59.68
  • 59.68
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
9.58e3
  • 9.58e3
59.40
  • 59.40
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
9.60e3
  • 9.60e3
59.29
  • 59.29
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
9.68e3
  • 9.68e3
58.97
  • 58.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
9.69e3
  • 9.69e3
  • 1.13e4
  • 1.16e4
58.93
  • 58.93
  • 52.19
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
58.87
  • 58.87
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
9.76e3
  • 9.76e3
58.64
  • 58.64
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
9.93e3
  • 9.93e3
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
  • 1.29e4
57.15
  • 57.15
  • 45.14
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
  • 1.10e4
56.79
  • 56.79
  • 53.44
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.07e4
  • 1.11e4
  • 1.13e4
55.61
  • 55.61
  • 54.75
  • 52.99
  • 52.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.33
  • 54.33
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.17
  • 54.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000004105.

Cross-references

EnsemblENSSSCG00000004105 (NUP43)
HGNCHGNC:21182 (NUP43)
EMBLCU571230
Uniprot/SPTREMBLF1S7T5, F1S7T5_PIG

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