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S. scrofa Gene: FBXL4 - ENSSSCG00000004347 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000004347
NameFBXL4
DescriptionF-box and leucine-rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
OrganismSus scrofa (pig)
Synonym(s)fbl4, fbl5
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.61e3
  • 1.61e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.96e3
  • 1.96e3
91.69
  • 91.69
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
2.08e3
  • 2.08e3
  • 4.34e3
  • 5.42e3
  • 5.80e3
  • 9.04e3
91.19
  • 91.19
  • 81.59
  • 77.04
  • 75.40
  • 61.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.83e3
  • 3.83e3
83.77
  • 83.77
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
4.72e3
  • 4.72e3
79.98
  • 79.98
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
5.12e3
  • 5.12e3
  • 7.56e3
  • 7.96e3
78.29
  • 78.29
  • 67.94
  • 66.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
5.19e3
  • 5.19e3
78.02
  • 78.02
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
5.31e3
  • 5.31e3
77.49
  • 77.49
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
5.31e3
  • 5.31e3
77.48
  • 77.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
5.38e3
  • 5.38e3
  • 7.92e3
  • 8.39e3
77.19
  • 77.19
  • 66.45
  • 64.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
5.40e3
  • 5.40e3
77.12
  • 77.12
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
5.75e3
  • 5.75e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
5.92e3
  • 5.92e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
6.04e3
  • 6.04e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.07e3
  • 6.07e3
  • 8.24e3
74.29
  • 74.29
  • 65.07
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.20e3
  • 6.20e3
  • 6.46e3
  • 9.03e3
73.70
  • 73.70
  • 72.61
  • 61.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
6.54e3
  • 6.54e3
  • 8.47e3
  • 1.24e4
72.28
  • 72.28
  • 64.10
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
6.97e3
  • 6.97e3
70.46
  • 70.46
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.00e3
  • 7.00e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.21e3
  • 7.21e3
69.42
  • 69.42
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
7.22e3
  • 7.22e3
69.38
  • 69.38
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
7.27e3
  • 7.27e3
  • 8.02e3
69.17
  • 69.17
  • 66.03
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
7.71e3
  • 7.71e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
7.79e3
  • 7.79e3
66.98
  • 66.98
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
7.81e3
  • 7.81e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
7.82e3
  • 7.82e3
66.87
  • 66.87
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
7.87e3
  • 7.87e3
  • 8.65e3
  • 1.21e4
66.65
  • 66.65
  • 63.36
  • 48.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.02e3
  • 8.02e3
  • 9.42e3
65.99
  • 65.99
  • 60.09
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
8.07e3
  • 8.07e3
65.81
  • 65.81
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
8.47e3
  • 8.47e3
64.09
  • 64.09
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
8.71e3
  • 8.71e3
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
8.71e3
  • 8.71e3
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.78e3
  • 8.78e3
  • 9.66e3
62.77
  • 62.77
  • 59.07
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
8.83e3
  • 8.83e3
  • 1.02e4
62.56
  • 62.56
  • 56.78
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
8.87e3
  • 8.87e3
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
8.89e3
  • 8.89e3
62.31
  • 62.31
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
61.93
  • 61.93
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
9.16e3
  • 9.16e3
61.17
  • 61.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.22e3
  • 9.22e3
  • 9.70e3
  • 1.06e4
60.93
  • 60.93
  • 58.90
  • 54.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.36e3
  • 9.36e3
  • 1.01e4
  • 1.15e4
  • 1.16e4
60.31
  • 60.31
  • 57.09
  • 51.09
  • 50.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
9.56e3
  • 9.56e3
59.47
  • 59.47
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
9.59e3
  • 9.59e3
59.34
  • 59.34
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.61
  • 56.61
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
54.65
  • 54.65
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.60
  • 54.60
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
53.73
  • 53.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
  • 1.36e4
52.42
  • 52.42
  • 42.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000004347.

Cross-references

EnsemblENSSSCG00000004347 (FBXL4)
HGNCHGNC:13601 (FBXL4)
EMBLCU210878, FJ719777
Uniprot/SPTREMBLD2ST34, D2ST34_PIG

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