S. scrofa Gene: - ENSSSCG00000004687 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000004687
Name-
DescriptionBeta-2-microglobulin [Source:UniProtKB/Swiss-Prot;Acc:Q07717]
OrganismSus scrofa (pig)
Synonym(s)q8wn08
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
38.7
  • 38.7
99.84
  • 99.84
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
45.5
  • 45.5
  • 88.0
  • 124
99.81
  • 99.81
  • 99.63
  • 99.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
54.7
  • 54.7
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
63.0
  • 63.0
  • 73.0
  • 150
99.74
  • 99.74
  • 99.69
  • 99.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
98.0
  • 98.0
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
106
  • 106
  • 625
  • 1.24e4
99.55
  • 99.55
  • 97.35
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
121
  • 121
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
121
  • 121
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
125
  • 125
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
138
  • 138
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
146
  • 146
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
147
  • 147
  • 333
  • 542
99.38
  • 99.38
  • 98.59
  • 97.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
158
  • 158
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
184
  • 184
  • 425
  • 459
99.22
  • 99.22
  • 98.20
  • 98.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
187
  • 187
  • 269
99.21
  • 99.21
  • 98.86
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
188
  • 188
  • 202
  • 598
99.21
  • 99.21
  • 99.15
  • 97.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
190
  • 190
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
207
  • 207
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
264
  • 264
  • 527
98.89
  • 98.89
  • 97.77
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
344
  • 344
98.55
  • 98.55
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
356
  • 356
98.50
  • 98.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
373
  • 373
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
381
  • 381
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
398
  • 398
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
431
  • 431
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
487
  • 487
  • 805
97.94
  • 97.94
  • 96.59
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
586
  • 586
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
591
  • 591
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
592
  • 592
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
597
  • 597
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
652
  • 652
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
697
  • 697
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
713
  • 713
96.98
  • 96.98
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
725
  • 725
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
758
  • 758
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
759
  • 759
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
772
  • 772
  • 1.04e3
96.73
  • 96.73
  • 95.61
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
799
  • 799
  • 815
  • 1.64e3
  • 2.63e3
96.62
  • 96.62
  • 96.55
  • 93.04
  • 88.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
799
  • 799
  • 894
  • 952
  • 983
  • 1.78e3
96.62
  • 96.62
  • 96.21
  • 95.97
  • 95.84
  • 92.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
805
  • 805
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
807
  • 807
96.58
  • 96.58
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
877
  • 877
96.29
  • 96.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.07e3
  • 1.07e3
  • 1.37e3
95.45
  • 95.45
  • 94.20
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
3.09e3
  • 3.09e3
86.91
  • 86.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.71e3
  • 3.71e3
  • 4.33e3
84.27
  • 84.27
  • 81.65
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.20e3
  • 8.20e3
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.35e3
  • 8.35e3
64.59
  • 64.59
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
50.20
  • 50.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species6 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Mammalia14 species16 genesCompare expression
Amniota15 species18 genesCompare expression
Tetrapoda16 species19 genesCompare expression
Euteleostomi17 species21 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000004687.

Cross-references

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