S. scrofa Gene: - ENSSSCG00000004737 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000004737
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.10e4
  • 1.10e4
  • 1.33e4
53.35
  • 53.35
  • 43.55
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.13e4
  • 1.13e4
52.30
  • 52.30
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
51.08
  • 51.08
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.19e4
  • 1.19e4
  • 1.25e4
  • 1.27e4
  • 1.44e4
  • 1.48e4
49.37
  • 49.37
  • 47.13
  • 46.04
  • 39.05
  • 37.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
49.21
  • 49.21
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.20e4
  • 1.20e4
  • 1.24e4
48.97
  • 48.97
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.22e4
  • 1.22e4
  • 1.33e4
48.42
  • 48.42
  • 43.51
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
47.73
  • 47.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
  • 1.31e4
  • 1.41e4
47.69
  • 47.69
  • 44.68
  • 40.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
  • 1.52e4
  • 1.54e4
46.55
  • 46.55
  • 35.48
  • 34.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
43.68
  • 43.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.48e4
43.35
  • 43.35
  • 37.11
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
42.34
  • 42.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
41.33
  • 41.33
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
  • 1.43e4
  • 1.51e4
  • 1.53e4
40.70
  • 40.70
  • 39.25
  • 35.94
  • 34.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.41e4
  • 1.41e4
40.12
  • 40.12
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
40.00
  • 40.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.43e4
  • 1.43e4
  • 1.44e4
39.25
  • 39.25
  • 38.94
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
38.62
  • 38.62
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
38.20
  • 38.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
38.19
  • 38.19
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.56e4
  • 1.56e4
33.71
  • 33.71
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
33.70
  • 33.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Amniota13 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000004737.

Cross-references

EnsemblENSSSCG00000004737
EMBLCU468106
Uniprot/SPTREMBLF1SSW8, F1SSW8_PIG

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