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S. scrofa Gene: FERMT2 - ENSSSCG00000005041 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000005041
NameFERMT2
Descriptionfermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
OrganismSus scrofa (pig)
Synonym(s)kind2, mig-2, plekhc1, unc112b
Orthologs(s)31 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
399
  • 399
98.31
  • 98.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
662
  • 662
  • 778
  • 1.28e3
97.20
  • 97.20
  • 96.71
  • 94.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
693
  • 693
  • 1.33e3
  • 2.46e3
97.07
  • 97.07
  • 94.35
  • 89.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
718
  • 718
  • 1.12e3
  • 1.24e4
96.96
  • 96.96
  • 95.28
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
807
  • 807
  • 1.22e3
  • 1.83e3
96.58
  • 96.58
  • 94.82
  • 92.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
856
  • 856
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
859
  • 859
  • 1.49e3
  • 1.58e3
  • 1.71e3
  • 2.11e3
96.36
  • 96.36
  • 93.68
  • 93.33
  • 92.76
  • 91.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
862
  • 862
  • 1.31e3
96.35
  • 96.35
  • 94.46
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
951
  • 951
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.09e3
  • 1.09e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.23e3
  • 1.23e3
94.77
  • 94.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.25e3
  • 1.25e3
  • 1.95e3
  • 3.32e3
94.69
  • 94.69
  • 91.72
  • 85.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.31e3
  • 1.31e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.32e3
  • 1.32e3
94.42
  • 94.42
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.33e3
  • 1.33e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.49e3
  • 1.49e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.58e3
  • 1.58e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.59e3
  • 1.59e3
93.26
  • 93.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.60e3
  • 1.60e3
  • 1.90e3
  • 3.21e3
93.22
  • 93.22
  • 91.96
  • 86.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.70e3
  • 1.70e3
92.81
  • 92.81
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.75e3
  • 1.75e3
92.60
  • 92.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.81e3
  • 1.81e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.86e3
  • 1.86e3
92.14
  • 92.14
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
  • 2.45e3
92.07
  • 92.07
  • 89.60
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.89e3
  • 1.89e3
  • 2.69e3
92.00
  • 92.00
  • 88.61
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.91e3
  • 1.91e3
91.90
  • 91.90
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
2.05e3
  • 2.05e3
91.31
  • 91.31
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.05e3
  • 2.05e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
2.10e3
  • 2.10e3
  • 2.57e3
91.09
  • 91.09
  • 89.10
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.22e3
  • 2.22e3
  • 3.38e3
90.61
  • 90.61
  • 85.68
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
2.32e3
  • 2.32e3
90.18
  • 90.18
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
  • 2.38e3
  • 3.31e3
  • 3.78e3
90.08
  • 90.08
  • 89.92
  • 85.98
  • 83.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.37e3
  • 2.37e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
2.40e3
  • 2.40e3
89.85
  • 89.85
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
2.41e3
  • 2.41e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.79e3
  • 2.79e3
88.16
  • 88.16
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
2.95e3
  • 2.95e3
87.52
  • 87.52
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
87.26
  • 87.26
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
3.12e3
  • 3.12e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
3.26e3
  • 3.26e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
3.30e3
  • 3.30e3
86.01
  • 86.01
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
5.53e3
  • 5.53e3
76.58
  • 76.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
5.60e3
  • 5.60e3
  • 5.85e3
76.27
  • 76.27
  • 75.21
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
6.38e3
  • 6.38e3
72.98
  • 72.98
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
7.20e3
  • 7.20e3
69.50
  • 69.50
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
8.33e3
  • 8.33e3
64.69
  • 64.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species31 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000005041.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000005041.

Cross-references

EnsemblENSSSCG00000005041 (FERMT2)
HGNCHGNC:15767 (FERMT2)
EMBLCU041278, CU407115
Uniprot/SPTREMBLF1SFE3, F1SFE3_PIG

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