S. scrofa Gene: - ENSSSCG00000005734 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000005734
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
5.96e3
  • 5.96e3
  • 1.05e4
74.35
  • 74.35
  • 54.82
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.73e4
46.58
  • 46.58
  • 25.48
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.25e4
  • 1.25e4
  • 1.26e4
46.38
  • 46.38
  • 45.78
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.46e4
43.95
  • 43.95
  • 37.25
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
42.17
  • 42.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
40.20
  • 40.20
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
39.61
  • 39.61
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.48e4
  • 1.48e4
36.19
  • 36.19
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
34.66
  • 34.66
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.58e4
  • 1.58e4
31.91
  • 31.91
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
30.12
  • 30.12
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
20.84
  • 20.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP102076
EnsemblENSSSCG00000005734
Uniprot/SPTREMBLF1S0S5, F1S0S5_PIG

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