S. scrofa Gene: SQLE - ENSSSCG00000005970 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000005970
NameSQLE
Descriptionsqualene epoxidase [Source:HGNC Symbol;Acc:HGNC:11279]
OrganismSus scrofa (pig)
Synonym(s)sqle {eco:0000313|embl:bai48103.1,gn eco:0000313|ensembl:enssscp00000006378}
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
  • 1.18e3
  • 3.73e3
95.41
  • 95.41
  • 95.02
  • 84.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.12e3
  • 1.12e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.41e3
  • 1.41e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.45e3
  • 1.45e3
  • 1.51e3
93.87
  • 93.87
  • 93.61
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
  • 1.85e3
  • 3.03e3
93.79
  • 93.79
  • 92.17
  • 87.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.53e3
  • 1.53e3
93.51
  • 93.51
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.54e3
  • 1.54e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.60e3
  • 1.60e3
93.24
  • 93.24
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.64e3
  • 1.64e3
93.07
  • 93.07
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.81e3
  • 1.81e3
  • 2.14e3
92.34
  • 92.34
  • 90.94
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.82e3
  • 1.82e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.88e3
  • 1.88e3
  • 2.16e3
  • 2.17e3
  • 2.87e3
92.04
  • 92.04
  • 90.83
  • 90.82
  • 87.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.94e3
  • 1.94e3
  • 2.11e3
91.76
  • 91.76
  • 91.04
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.04e3
  • 2.04e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.09e3
  • 2.09e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
90.91
  • 90.91
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
2.24e3
  • 2.24e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.26e3
  • 2.26e3
90.41
  • 90.41
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
2.59e3
  • 2.59e3
89.02
  • 89.02
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
2.85e3
  • 2.85e3
  • 3.93e3
  • 9.71e3
87.91
  • 87.91
  • 83.35
  • 58.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
3.35e3
  • 3.35e3
85.80
  • 85.80
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
3.51e3
  • 3.51e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.78e3
  • 3.78e3
  • 5.15e3
83.96
  • 83.96
  • 78.18
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
4.19e3
  • 4.19e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
4.22e3
  • 4.22e3
82.12
  • 82.12
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
4.31e3
  • 4.31e3
81.73
  • 81.73
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
4.74e3
  • 4.74e3
79.93
  • 79.93
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.87e3
  • 4.87e3
79.36
  • 79.36
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
5.08e3
  • 5.08e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
5.13e3
  • 5.13e3
78.27
  • 78.27
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.32e3
  • 6.32e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.25e3
  • 7.25e3
  • 1.03e4
  • 1.16e4
  • 1.33e4
  • 1.36e4
69.26
  • 69.26
  • 56.40
  • 50.85
  • 43.70
  • 42.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
7.79e3
  • 7.79e3
66.99
  • 66.99
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.83e3
  • 7.83e3
66.81
  • 66.81
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
8.10e3
  • 8.10e3
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.16e3
  • 8.16e3
  • 1.05e4
65.43
  • 65.43
  • 55.62
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.40e3
  • 8.40e3
  • 1.15e4
  • 1.24e4
64.40
  • 64.40
  • 51.14
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
8.77e3
  • 8.77e3
  • 9.63e3
62.83
  • 62.83
  • 59.16
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.86e3
  • 8.86e3
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
9.10e3
  • 9.10e3
  • 9.76e3
  • 1.09e4
61.42
  • 61.42
  • 58.65
  • 53.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
9.41e3
  • 9.41e3
  • 1.06e4
  • 1.08e4
60.12
  • 60.12
  • 55.10
  • 54.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.67
  • 55.67
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.82
  • 54.82
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.09e4
  • 1.09e4
53.59
  • 53.59
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.14e4
  • 1.14e4
51.54
  • 51.54
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
43.89
  • 43.89
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.98
  • 39.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000005970.

Cross-references

EnsemblENSSSCG00000005970 (SQLE)
HGNCHGNC:11279 (SQLE)
EMBLAB530156, CU407238, CU633319, EF683117
Uniprot/SPTREMBLA7L861, A7L861_PIG

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