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S. scrofa Gene: NSMAF - ENSSSCG00000006236 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000006236
NameNSMAF
Descriptionneutral sphingomyelinase activation associated factor [Source:HGNC Symbol;Acc:HGNC:8017]
OrganismSus scrofa (pig)
Synonym(s)fan, gramd5
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.09e3
  • 1.09e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
4.11e3
  • 4.11e3
82.59
  • 82.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
4.40e3
  • 4.40e3
  • 5.57e3
81.34
  • 81.34
  • 76.39
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.57e3
  • 4.57e3
  • 4.99e3
  • 6.35e3
80.65
  • 80.65
  • 78.84
  • 73.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
5.70e3
  • 5.70e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.71e3
  • 5.71e3
75.82
  • 75.82
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
5.72e3
  • 5.72e3
75.74
  • 75.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
6.11e3
  • 6.11e3
  • 7.13e3
  • 7.66e3
74.08
  • 74.08
  • 69.80
  • 67.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.29e3
  • 6.29e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.43e3
  • 6.43e3
72.74
  • 72.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.61e3
  • 6.61e3
  • 7.69e3
  • 1.17e4
71.98
  • 71.98
  • 67.40
  • 50.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
6.69e3
  • 6.69e3
  • 7.78e3
  • 8.79e3
71.64
  • 71.64
  • 67.04
  • 62.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
6.87e3
  • 6.87e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
7.61e3
  • 7.61e3
67.74
  • 67.74
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
7.81e3
  • 7.81e3
  • 8.02e3
  • 8.68e3
  • 9.16e3
  • 1.04e4
66.88
  • 66.88
  • 66.02
  • 63.21
  • 61.16
  • 55.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
7.81e3
  • 7.81e3
66.88
  • 66.88
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
7.89e3
  • 7.89e3
66.55
  • 66.55
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
8.18e3
  • 8.18e3
  • 8.91e3
65.34
  • 65.34
  • 62.23
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
8.21e3
  • 8.21e3
65.21
  • 65.21
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
8.34e3
  • 8.34e3
  • 1.24e4
  • 1.32e4
64.65
  • 64.65
  • 47.51
  • 44.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.42e3
  • 8.42e3
64.33
  • 64.33
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
8.98e3
  • 8.98e3
61.93
  • 61.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
9.24e3
  • 9.24e3
60.82
  • 60.82
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
9.27e3
  • 9.27e3
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
9.37e3
  • 9.37e3
60.30
  • 60.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.42e3
  • 9.42e3
  • 1.00e4
  • 1.26e4
60.06
  • 60.06
  • 57.45
  • 46.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.52e3
  • 9.52e3
59.64
  • 59.64
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
9.54e3
  • 9.54e3
59.57
  • 59.57
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.58e3
  • 9.58e3
  • 1.07e4
  • 1.08e4
  • 1.09e4
59.38
  • 59.38
  • 54.73
  • 54.35
  • 53.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
9.74e3
  • 9.74e3
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
9.77e3
  • 9.77e3
58.61
  • 58.61
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
9.78e3
  • 9.78e3
58.56
  • 58.56
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
9.79e3
  • 9.79e3
58.49
  • 58.49
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
  • 1.10e4
57.29
  • 57.29
  • 53.42
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.03e4
56.85
  • 56.85
  • 56.15
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
53.64
  • 53.64
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.10e4
  • 1.10e4
  • 1.15e4
53.43
  • 53.43
  • 51.39
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.12e4
  • 1.12e4
52.70
  • 52.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
52.40
  • 52.40
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.45
  • 51.45
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.66
  • 50.66
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
50.03
  • 50.03
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.85
  • 48.85
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.14
  • 48.14
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.08
  • 48.08
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.77
  • 45.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000006236.

Cross-references

EnsemblENSSSCG00000006236 (NSMAF)
HGNCHGNC:8017 (NSMAF)
EMBLCU137714
Uniprot/SPTREMBLF1RT84, F1RT84_PIG

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