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S. scrofa Gene: AGL - ENSSSCG00000006872 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000006872
NameAGL
Descriptionamylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
OrganismSus scrofa (pig)
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
206
  • 206
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
237
  • 237
  • 322
  • 360
  • 445
  • 1.80e3
99.00
  • 99.00
  • 98.64
  • 98.48
  • 98.12
  • 92.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
833
  • 833
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
912
  • 912
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
964
  • 964
95.92
  • 95.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.54e3
  • 1.54e3
  • 2.02e3
  • 6.83e3
93.47
  • 93.47
  • 91.43
  • 71.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.81e3
  • 1.81e3
92.33
  • 92.33
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
2.27e3
  • 2.27e3
90.38
  • 90.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
2.40e3
  • 2.40e3
  • 7.35e3
89.82
  • 89.82
  • 68.86
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
2.72e3
  • 2.72e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.96e3
  • 2.96e3
  • 3.60e3
  • 7.87e3
87.46
  • 87.46
  • 84.74
  • 66.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
4.03e3
  • 4.03e3
82.92
  • 82.92
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
4.06e3
  • 4.06e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
4.60e3
  • 4.60e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
4.68e3
  • 4.68e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
4.86e3
  • 4.86e3
79.41
  • 79.41
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.02e3
  • 5.02e3
  • 1.10e4
78.72
  • 78.72
  • 53.48
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
  • 7.98e3
78.38
  • 78.38
  • 66.17
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
5.21e3
  • 5.21e3
77.90
  • 77.90
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
5.24e3
  • 5.24e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
5.24e3
  • 5.24e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
5.82e3
  • 5.82e3
75.34
  • 75.34
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.05e3
  • 6.05e3
74.37
  • 74.37
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
6.26e3
  • 6.26e3
73.46
  • 73.46
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
  • 1.24e4
  • 1.30e4
71.58
  • 71.58
  • 47.51
  • 45.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
6.85e3
  • 6.85e3
70.95
  • 70.95
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
7.27e3
  • 7.27e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.53e3
  • 7.53e3
68.07
  • 68.07
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
7.68e3
  • 7.68e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.75e3
  • 7.75e3
  • 1.24e4
67.16
  • 67.16
  • 47.53
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
  • 9.45e3
66.97
  • 66.97
  • 59.93
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.08e3
  • 8.08e3
  • 1.02e4
  • 1.23e4
65.75
  • 65.75
  • 56.88
  • 47.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.15e3
  • 8.15e3
65.46
  • 65.46
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
8.17e3
  • 8.17e3
65.39
  • 65.39
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
8.29e3
  • 8.29e3
64.85
  • 64.85
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.72e3
  • 8.72e3
  • 9.51e3
  • 1.01e4
  • 1.06e4
63.03
  • 63.03
  • 59.68
  • 57.31
  • 54.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.86e3
  • 8.86e3
  • 9.37e3
  • 1.20e4
62.46
  • 62.46
  • 60.28
  • 49.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
8.99e3
  • 8.99e3
  • 1.22e4
  • 1.28e4
61.90
  • 61.90
  • 48.27
  • 45.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
9.03e3
  • 9.03e3
61.74
  • 61.74
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
9.64e3
  • 9.64e3
59.13
  • 59.13
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.68
  • 55.68
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.06e4
  • 1.06e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.58
  • 54.58
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.21e4
52.80
  • 52.80
  • 48.73
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.23e4
  • 1.23e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.62
  • 43.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000006872.

Cross-references

EnsemblENSSSCG00000006872 (AGL)
HGNCHGNC:321 (AGL)
EMBLCU138489
Uniprot/SPTREMBLF1S557, F1S557_PIG

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