S. scrofa Gene: BCAS1 - ENSSSCG00000007485 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000007485
NameBCAS1
Descriptionbreast carcinoma-amplified sequence 1 [Source:RefSeq peptide;Acc:NP_001103645]
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
219
  • 219
99.08
  • 99.08
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
237
  • 237
99.00
  • 99.00
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
252
  • 252
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
255
  • 255
98.92
  • 98.92
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
415
  • 415
98.25
  • 98.25
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
499
  • 499
  • 838
  • 974
  • 1.22e3
97.89
  • 97.89
  • 96.45
  • 95.87
  • 94.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
520
  • 520
  • 1.29e3
97.80
  • 97.80
  • 94.55
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
662
  • 662
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
666
  • 666
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
689
  • 689
  • 2.74e3
97.08
  • 97.08
  • 88.41
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
783
  • 783
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.46e3
  • 1.46e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.67e3
  • 1.67e3
92.94
  • 92.94
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
2.10e3
  • 2.10e3
91.09
  • 91.09
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.17e3
  • 2.17e3
90.80
  • 90.80
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
2.49e3
  • 2.49e3
  • 6.93e3
  • 8.86e3
89.44
  • 89.44
  • 70.61
  • 62.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
2.69e3
  • 2.69e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
3.01e3
  • 3.01e3
87.24
  • 87.24
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
85.70
  • 85.70
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
  • 4.97e3
  • 5.03e3
82.78
  • 82.78
  • 78.93
  • 78.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
7.24e3
  • 7.24e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
7.43e3
  • 7.43e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.02e3
  • 8.02e3
65.99
  • 65.99
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
8.23e3
  • 8.23e3
65.14
  • 65.14
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
  • 1.28e4
  • 1.34e4
  • 1.39e4
  • 1.54e4
52.72
  • 52.72
  • 45.82
  • 43.36
  • 41.29
  • 34.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
47.71
  • 47.71
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
  • 1.34e4
47.51
  • 47.51
  • 43.38
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
47.20
  • 47.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.31e4
  • 1.31e4
  • 1.60e4
44.28
  • 44.28
  • 32.23
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
44.22
  • 44.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.49e4
  • 1.57e4
41.74
  • 41.74
  • 37.02
  • 33.27
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.20
  • 39.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
38.08
  • 38.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.48e4
  • 1.48e4
  • 1.81e4
  • 1.84e4
37.16
  • 37.16
  • 23.23
  • 22.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.54e4
  • 1.54e4
34.53
  • 34.53
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 1.73e4
30.52
  • 30.52
  • 26.71
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
29.80
  • 29.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.76e4
  • 1.76e4
25.45
  • 25.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000007485.

Cross-references

EnsemblENSSSCG00000007485 (BCAS1)
EMBLCR956383, CR956635
Uniprot/SPTREMBLA5GFR8, A5GFR8_PIG

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