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S. scrofa Gene: CBLN4 - ENSSSCG00000007490 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000007490
NameCBLN4
Descriptioncerebellin 4 precursor [Source:HGNC Symbol;Acc:HGNC:16231]
OrganismSus scrofa (pig)
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
7.24e3
  • 7.24e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
9.73e3
  • 9.73e3
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.85e3
  • 9.85e3
58.25
  • 58.25
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.70
  • 56.70
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.42
  • 51.42
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
49.03
  • 49.03
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.35
  • 47.35
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.39e4
  • 1.39e4
  • 1.48e4
  • 1.55e4
  • 1.59e4
41.16
  • 41.16
  • 37.47
  • 34.47
  • 32.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.69
  • 40.69
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
36.51
  • 36.51
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
29.81
  • 29.81
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.71e4
  • 1.71e4
27.68
  • 27.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
22.16
  • 22.16
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.86e4
  • 1.86e4
21.24
  • 21.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
18.96
  • 18.96
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
1.98e4
  • 1.98e4
16.08
  • 16.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000007490.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000007490.

Cross-references

EnsemblENSSSCG00000007490 (CBLN4)
EMBLCR956373, JN038181
Uniprot/SPTREMBLA5GFP7, A5GFP7_PIG

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