We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: STX4 - ENSSSCG00000007768 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000007768
NameSTX4
Descriptionsyntaxin 4 [Source:HGNC Symbol;Acc:HGNC:11439]
OrganismSus scrofa (pig)
Synonym(s)p35-2, stx4a
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
3.67e3
  • 3.67e3
  • 4.46e3
  • 8.39e3
84.43
  • 84.43
  • 81.11
  • 64.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
3.70e3
  • 3.70e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
3.70e3
  • 3.70e3
  • 1.11e4
  • 1.24e4
84.31
  • 84.31
  • 52.92
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
3.76e3
  • 3.76e3
  • 5.30e3
  • 1.10e4
84.08
  • 84.08
  • 77.55
  • 53.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
3.76e3
  • 3.76e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
3.95e3
  • 3.95e3
  • 4.32e3
83.25
  • 83.25
  • 81.71
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
4.04e3
  • 4.04e3
  • 4.27e3
  • 5.19e3
  • 5.43e3
  • 8.54e3
82.89
  • 82.89
  • 81.90
  • 77.99
  • 76.99
  • 63.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
4.40e3
  • 4.40e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
4.66e3
  • 4.66e3
  • 4.82e3
  • 6.68e3
80.24
  • 80.24
  • 79.57
  • 71.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
5.18e3
  • 5.18e3
  • 6.92e3
  • 1.09e4
78.06
  • 78.06
  • 70.66
  • 54.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
5.23e3
  • 5.23e3
77.83
  • 77.83
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
5.42e3
  • 5.42e3
77.04
  • 77.04
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
5.70e3
  • 5.70e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
5.86e3
  • 5.86e3
  • 9.73e3
75.15
  • 75.15
  • 58.76
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.04e3
  • 6.04e3
  • 6.54e3
  • 1.23e4
74.40
  • 74.40
  • 72.29
  • 47.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
6.39e3
  • 6.39e3
72.92
  • 72.92
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
6.46e3
  • 6.46e3
  • 8.75e3
  • 9.20e3
  • 9.89e3
72.63
  • 72.63
  • 62.92
  • 61.01
  • 58.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
6.47e3
  • 6.47e3
72.57
  • 72.57
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
6.50e3
  • 6.50e3
72.44
  • 72.44
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.51e3
  • 6.51e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.57e3
  • 6.57e3
  • 1.29e4
72.14
  • 72.14
  • 45.52
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
6.66e3
  • 6.66e3
  • 8.50e3
71.77
  • 71.77
  • 63.96
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
7.13e3
  • 7.13e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.53e3
  • 7.53e3
68.08
  • 68.08
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
7.80e3
  • 7.80e3
66.93
  • 66.93
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
7.86e3
  • 7.86e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.92e3
  • 7.92e3
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.98e3
  • 7.98e3
66.19
  • 66.19
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
8.00e3
  • 8.00e3
66.08
  • 66.08
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
8.01e3
  • 8.01e3
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
8.78e3
  • 8.78e3
62.77
  • 62.77
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
9.06e3
  • 9.06e3
61.58
  • 61.58
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.29e3
  • 9.29e3
60.61
  • 60.61
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
9.31e3
  • 9.31e3
60.56
  • 60.56
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
9.50e3
  • 9.50e3
59.72
  • 59.72
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
9.75e3
  • 9.75e3
58.68
  • 58.68
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
9.91e3
  • 9.91e3
57.99
  • 57.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
56.55
  • 56.55
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.14e4
  • 1.14e4
51.74
  • 51.74
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
51.65
  • 51.65
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.27
  • 47.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
  • 1.43e4
47.10
  • 47.10
  • 39.39
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
47.09
  • 47.09
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
46.85
  • 46.85
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
46.55
  • 46.55
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.99
  • 44.99
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.28
  • 42.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000007768.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000007768.

Cross-references

EnsemblENSSSCG00000007768 (STX4)
HGNCHGNC:11439 (STX4)
EMBLCU914342
Uniprot/SPTREMBLF1RIR2, F1RIR2_PIG

Do not show this banner again