S. scrofa Gene: - ENSSSCG00000007773 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000007773
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
35.85
  • 35.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
  • 2.01e4
27.62
  • 27.62
  • 15.00
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
  • 1.83e4
  • 2.16e4
24.18
  • 24.18
  • 22.48
  • 8.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
21.96
  • 21.96
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 1.92e4
21.81
  • 21.81
  • 18.75
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.85e4
  • 1.85e4
21.38
  • 21.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria7 species7 genesCompare expression
Theria8 species8 genesCompare expression
Mammalia9 species9 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000007773.

Cross-references

EnsemblENSSSCG00000007773
EMBLFP102303
Uniprot/SPTREMBLF1RGA1, F1RGA1_PIG

Do not show this banner again