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S. scrofa Gene: CCT7 - ENSSSCG00000008303 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008303
NameCCT7
DescriptionT-complex protein 1 subunit eta [Source:RefSeq peptide;Acc:NP_001163993]
OrganismSus scrofa (pig)
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
351
  • 351
  • 694
98.51
  • 98.51
  • 97.06
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
388
  • 388
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
410
  • 410
98.26
  • 98.26
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
470
  • 470
98.01
  • 98.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
579
  • 579
  • 1.75e3
97.55
  • 97.55
  • 92.59
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
591
  • 591
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
660
  • 660
  • 2.22e3
97.21
  • 97.21
  • 90.59
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
698
  • 698
  • 818
  • 2.33e3
97.05
  • 97.05
  • 96.54
  • 90.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
712
  • 712
  • 741
  • 747
96.99
  • 96.99
  • 96.86
  • 96.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
731
  • 731
  • 779
  • 886
  • 948
  • 1.19e3
96.90
  • 96.90
  • 96.70
  • 96.25
  • 95.99
  • 94.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
764
  • 764
  • 838
  • 879
  • 1.35e3
96.77
  • 96.77
  • 96.45
  • 96.28
  • 94.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
781
  • 781
  • 794
  • 1.68e3
96.69
  • 96.69
  • 96.64
  • 92.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
819
  • 819
96.53
  • 96.53
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
861
  • 861
  • 1.01e3
  • 1.93e3
96.36
  • 96.36
  • 95.71
  • 91.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
878
  • 878
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
892
  • 892
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
950
  • 950
  • 1.02e3
95.98
  • 95.98
  • 95.67
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
965
  • 965
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
995
  • 995
95.79
  • 95.79
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.00e3
  • 1.00e3
95.76
  • 95.76
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
95.50
  • 95.50
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.08e3
  • 1.08e3
  • 1.45e3
  • 1.24e4
95.44
  • 95.44
  • 93.87
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.08e3
  • 1.08e3
  • 3.09e3
95.43
  • 95.43
  • 86.92
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.10e3
  • 1.10e3
95.34
  • 95.34
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.15e3
  • 1.15e3
95.11
  • 95.11
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.22e3
  • 1.22e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.31e3
  • 1.31e3
  • 1.32e3
94.46
  • 94.46
  • 94.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.35e3
  • 1.35e3
  • 1.38e3
  • 2.03e3
94.30
  • 94.30
  • 94.14
  • 91.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.45e3
  • 1.45e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.46e3
  • 1.46e3
93.81
  • 93.81
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.53e3
  • 1.53e3
93.50
  • 93.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.54e3
  • 1.54e3
93.49
  • 93.49
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.73e3
  • 1.73e3
92.67
  • 92.67
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.75e3
  • 1.75e3
92.56
  • 92.56
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.86e3
  • 1.86e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.87e3
  • 1.87e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.88e3
  • 1.88e3
92.05
  • 92.05
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.93e3
  • 1.93e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.94e3
  • 1.94e3
91.78
  • 91.78
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.99e3
  • 1.99e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
2.00e3
  • 2.00e3
91.52
  • 91.52
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
2.00e3
  • 2.00e3
91.51
  • 91.51
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.15e3
  • 2.15e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
2.25e3
  • 2.25e3
90.48
  • 90.48
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.46e3
  • 2.46e3
89.56
  • 89.56
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
2.66e3
  • 2.66e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.13e3
  • 3.13e3
86.74
  • 86.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000008303.

Cross-references

EnsemblENSSSCG00000008303 (CCT7)
EMBLFP089556
Uniprot/SPTREMBLF1SLF6, F1SLF6_PIG

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