S. scrofa Gene: - ENSSSCG00000008422 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008422
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.49
  • 91.49
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
2.35e3
  • 2.35e3
  • 2.82e3
  • 6.25e3
90.04
  • 90.04
  • 88.07
  • 73.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
3.40e3
  • 3.40e3
  • 7.54e3
85.60
  • 85.60
  • 68.05
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.54e3
  • 4.54e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
4.57e3
  • 4.57e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.65e3
  • 4.65e3
80.31
  • 80.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
4.81e3
  • 4.81e3
  • 5.00e3
  • 7.88e3
79.63
  • 79.63
  • 78.80
  • 66.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.16e3
  • 5.16e3
  • 6.66e3
78.12
  • 78.12
  • 71.77
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
5.92e3
  • 5.92e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
6.53e3
  • 6.53e3
  • 6.94e3
  • 8.18e3
72.32
  • 72.32
  • 70.60
  • 65.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
6.55e3
  • 6.55e3
  • 6.75e3
  • 1.24e4
72.23
  • 72.23
  • 71.40
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
6.66e3
  • 6.66e3
71.79
  • 71.79
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
7.01e3
  • 7.01e3
  • 9.90e3
  • 1.05e4
70.30
  • 70.30
  • 58.02
  • 55.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.41e3
  • 7.41e3
  • 1.09e4
68.61
  • 68.61
  • 53.69
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.48e3
  • 7.48e3
  • 9.57e3
68.30
  • 68.30
  • 59.43
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
7.73e3
  • 7.73e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
7.76e3
  • 7.76e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.98e3
  • 7.98e3
66.17
  • 66.17
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
8.10e3
  • 8.10e3
65.68
  • 65.68
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
8.13e3
  • 8.13e3
  • 9.24e3
  • 9.61e3
  • 1.01e4
  • 1.20e4
65.52
  • 65.52
  • 60.82
  • 59.25
  • 57.00
  • 49.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
8.15e3
  • 8.15e3
65.46
  • 65.46
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
8.19e3
  • 8.19e3
  • 9.70e3
65.27
  • 65.27
  • 58.87
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.35e3
  • 8.35e3
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
8.50e3
  • 8.50e3
63.97
  • 63.97
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
8.61e3
  • 8.61e3
63.52
  • 63.52
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
8.67e3
  • 8.67e3
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
8.69e3
  • 8.69e3
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.83e3
  • 8.83e3
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
9.10e3
  • 9.10e3
61.43
  • 61.43
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.12e3
  • 9.12e3
61.35
  • 61.35
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
9.15e3
  • 9.15e3
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
9.21e3
  • 9.21e3
  • 1.02e4
60.97
  • 60.97
  • 56.96
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
9.32e3
  • 9.32e3
60.48
  • 60.48
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
60.43
  • 60.43
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.37e3
  • 9.37e3
  • 1.00e4
  • 1.08e4
  • 1.12e4
60.29
  • 60.29
  • 57.47
  • 54.35
  • 52.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
9.38e3
  • 9.38e3
60.23
  • 60.23
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
9.65e3
  • 9.65e3
59.11
  • 59.11
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
9.67e3
  • 9.67e3
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.85e3
  • 9.85e3
58.27
  • 58.27
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
9.99e3
  • 9.99e3
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.40
  • 57.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
  • 1.09e4
  • 1.23e4
56.82
  • 56.82
  • 53.81
  • 47.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.59
  • 56.59
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.13e4
  • 1.13e4
51.92
  • 51.92
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.33
  • 51.33
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
46.94
  • 46.94
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.39e4
  • 1.39e4
41.06
  • 41.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

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