S. scrofa Gene: GAREM2 - ENSSSCG00000008572 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008572
NameGAREM2
DescriptionGRB2 associated regulator of MAPK1 subtype 2 [Source:HGNC Symbol;Acc:HGNC:27172]
OrganismSus scrofa (pig)
Synonym(s)fam59b, flj00375, gareml, kiaa2038
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
8.79e3
  • 8.79e3
62.73
  • 62.73
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
9.25e3
  • 9.25e3
60.79
  • 60.79
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
9.81e3
  • 9.81e3
58.42
  • 58.42
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.12e4
  • 1.28e4
56.91
  • 56.91
  • 55.62
  • 52.63
  • 45.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
56.08
  • 56.08
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
  • 1.14e4
  • 1.31e4
  • 1.33e4
  • 1.34e4
53.83
  • 53.83
  • 51.71
  • 44.43
  • 43.53
  • 43.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
53.25
  • 53.25
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.20e4
  • 1.20e4
49.21
  • 49.21
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.22e4
  • 1.22e4
48.23
  • 48.23
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.62e4
47.51
  • 47.51
  • 31.28
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
47.48
  • 47.48
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.48e4
44.16
  • 44.16
  • 37.35
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
38.82
  • 38.82
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.45e4
  • 1.45e4
38.63
  • 38.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.53e4
  • 1.53e4
  • 1.56e4
35.18
  • 35.18
  • 33.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
  • 1.61e4
  • 1.72e4
34.92
  • 34.92
  • 31.82
  • 27.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
  • 1.63e4
33.97
  • 33.97
  • 30.90
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.59e4
  • 1.59e4
32.81
  • 32.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
29.11
  • 29.11
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.70e4
  • 1.70e4
27.94
  • 27.94
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
  • 1.84e4
26.49
  • 26.49
  • 21.94
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
25.85
  • 25.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.83e4
  • 1.83e4
  • 2.06e4
  • 2.06e4
22.54
  • 22.54
  • 12.74
  • 12.74
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000008572.

Cross-references

EnsemblENSSSCG00000008572 (GAREM2)
HGNCHGNC:27172 (GAREM2)
EMBLCU571288
Uniprot/SPTREMBLF1SDN0, F1SDN0_PIG, I3L5T0, I3L5T0_PIG

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